The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yqhY [H]

Identifier: 126698796

GI number: 126698796

Start: 1399745

End: 1400107

Strand: Direct

Name: yqhY [H]

Synonym: CD1200

Alternate gene names: 126698796

Gene position: 1399745-1400107 (Clockwise)

Preceding gene: 126698795

Following gene: 126698797

Centisome position: 32.63

GC content: 29.2

Gene sequence:

>363_bases
ATGGAAGATAATAAATTTGGACAAGTAAAAATATCTAATGATGTAATAGCTACAATAGCTGGTTTAGCAGCATTAGAAGT
TGAAGGCATAGAAACTACAGCAACATTAACAGATAAGTTGTTAAAAAATAATGGAGTAAAAATACAAATCGAAGAAGAGG
ATGTTAATTTAGATGTAATGGTTACGATAAAGTATGGAATGTCAATACCAGATACAGCTTTTAAAGTTCAAGAAAATGTA
AAAAATACTGTTGAGACAATGACAGGACTGAAGGTTTCTCAAGTAAATATACACATTCAAGGAATCAGCTTTAAGAAGGA
TAAAGTTGATAAAGAAGAAGCAAAAGCAACTAAGAAAAATTAA

Upstream 100 bases:

>100_bases
CTCAGAATTAACTGAGGTTATTTTCTTGCAAAGTAGACTTGTATTTGGTATTATTATACTTATAAAAATAGTTCCTTAAA
ATCAGGAGGTAAGTTTTAAT

Downstream 100 bases:

>100_bases
TATTAGCCCTCTGAAAAGTCAGAGGGTTTTTTGCTGGTAATTGATTTTATATGGATAATTAAACTTAAAGGAGAATTTTG
ATTGATGAAAAAAGATAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MEDNKFGQVKISNDVIATIAGLAALEVEGIETTATLTDKLLKNNGVKIQIEEEDVNLDVMVTIKYGMSIPDTAFKVQENV
KNTVETMTGLKVSQVNIHIQGISFKKDKVDKEEAKATKKN

Sequences:

>Translated_120_residues
MEDNKFGQVKISNDVIATIAGLAALEVEGIETTATLTDKLLKNNGVKIQIEEEDVNLDVMVTIKYGMSIPDTAFKVQENV
KNTVETMTGLKVSQVNIHIQGISFKKDKVDKEEAKATKKN
>Mature_120_residues
MEDNKFGQVKISNDVIATIAGLAALEVEGIETTATLTDKLLKNNGVKIQIEEEDVNLDVMVTIKYGMSIPDTAFKVQENV
KNTVETMTGLKVSQVNIHIQGISFKKDKVDKEEAKATKKN

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005531 [H]

Pfam domain/function: PF03780 DUF322 [H]

EC number: NA

Molecular weight: Translated: 13195; Mature: 13195

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNKFGQVKISNDVIATIAGLAALEVEGIETTATLTDKLLKNNGVKIQIEEEDVNLDVM
CCCCCEEEEEECCCHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEE
VTIKYGMSIPDTAFKVQENVKNTVETMTGLKVSQVNIHIQGISFKKDKVDKEEAKATKKN
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MEDNKFGQVKISNDVIATIAGLAALEVEGIETTATLTDKLLKNNGVKIQIEEEDVNLDVM
CCCCCEEEEEECCCHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEE
VTIKYGMSIPDTAFKVQENVKNTVETMTGLKVSQVNIHIQGISFKKDKVDKEEAKATKKN
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]