The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698757

Identifier: 126698757

GI number: 126698757

Start: 1361544

End: 1361861

Strand: Direct

Name: 126698757

Synonym: CD1162

Alternate gene names: NA

Gene position: 1361544-1361861 (Clockwise)

Preceding gene: 126698756

Following gene: 126698758

Centisome position: 31.74

GC content: 27.36

Gene sequence:

>318_bases
ATGATAAAAGTTAAATATTATTATAATGATGATTTCTTGTTGCAAGGTTTTTGTTTAAAGGGACATGCTGATTTTGCTGA
AATAGGCTATGATATAGTATGTGCTGCAGTTACATCTAATGCTATTGCAGTTATAAATTCTTTAGACAAATTACAAAAGA
TTGAATTTGAAAAAGTAGTAGGAGAAGAAGGTCATATAGAGTGTATAGTCAAAGATACACATGTAAAAGACGCACAATTA
TTACTAAATCACTTTCAATTAGCGGTTAAAGAAATTAAACGGGAATACCCAAAAAATATAAAAATTTTAAAAAAGTAG

Upstream 100 bases:

>100_bases
AGTATAAAGCAAAAAAAGATTACAGAAGAAAACAAGGACATCGTCAATCATACACTAAGATAGTTGTAGAAAAAATAAAC
GCTTAGTTATTGGTTAAGTT

Downstream 100 bases:

>100_bases
GGGGTGACTCCATATGTTAAACATGAATTTACAATTATTAGCATCTAAAAAAGGGGTAGGTTCTTCTAAAAATGGTAGAG
ATTCTATATCTAAAAGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MIKVKYYYNDDFLLQGFCLKGHADFAEIGYDIVCAAVTSNAIAVINSLDKLQKIEFEKVVGEEGHIECIVKDTHVKDAQL
LLNHFQLAVKEIKREYPKNIKILKK

Sequences:

>Translated_105_residues
MIKVKYYYNDDFLLQGFCLKGHADFAEIGYDIVCAAVTSNAIAVINSLDKLQKIEFEKVVGEEGHIECIVKDTHVKDAQL
LLNHFQLAVKEIKREYPKNIKILKK
>Mature_105_residues
MIKVKYYYNDDFLLQGFCLKGHADFAEIGYDIVCAAVTSNAIAVINSLDKLQKIEFEKVVGEEGHIECIVKDTHVKDAQL
LLNHFQLAVKEIKREYPKNIKILKK

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12027; Mature: 12027

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVKYYYNDDFLLQGFCLKGHADFAEIGYDIVCAAVTSNAIAVINSLDKLQKIEFEKVV
CEEEEEEECCCEEEEEEEECCCCCHHHHCHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHC
GEEGHIECIVKDTHVKDAQLLLNHFQLAVKEIKREYPKNIKILKK
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MIKVKYYYNDDFLLQGFCLKGHADFAEIGYDIVCAAVTSNAIAVINSLDKLQKIEFEKVV
CEEEEEEECCCEEEEEEEECCCCCHHHHCHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHC
GEEGHIECIVKDTHVKDAQLLLNHFQLAVKEIKREYPKNIKILKK
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA