| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is mgsA
Identifier: 126698748
GI number: 126698748
Start: 1351740
End: 1352153
Strand: Direct
Name: mgsA
Synonym: CD1153
Alternate gene names: 126698748
Gene position: 1351740-1352153 (Clockwise)
Preceding gene: 126698747
Following gene: 126698749
Centisome position: 31.51
GC content: 30.92
Gene sequence:
>414_bases ATGAATATAGCATTAGTAGCACATGACCAAATGAAAAACACTATGGTCGGATTTTGTATAGGTTATGAATCAATTTTAAA AAAGTATGGACTATATGCAACTGGAACTACAGGAAAAAGAATAATGGATGAAACTGAATTAAATATAAATAGATTAGCAT CTGGTCCTTTAGGTGGAGACCAACAAATAGGTTCTTTAATAGTAACACAAGAAATAGATTTAGTTATTTTTTTAAGAGAC CCATTGACATCTCAGGCTCATGAAACAGATATACAAGCGTTAATAAGACTTTGTGATGTTTATCATGTTCCAATAGCTAC AAATCTAGCTTCAGCAGAAATATTTATAAAAGCTCTTGATAGAGGAGAACTATCATGGAGAGAAGTTAGAAAAAGCAAAA GTCAACGTATTTAA
Upstream 100 bases:
>100_bases TTAGCAAACTTAGGATTAGTACTAAATGTGTGTATGAGAAGAAAGAAAATAAATTTCTAAATTTAAATACATCTAAACAT AAATTGAGGAGATTAGATAT
Downstream 100 bases:
>100_bases AAAATATTAATATTACAGTCTAAAGAAACAGATATATAAGTGTTTAATGCCCTAGTCTTTCTGTTGGAATAAACCTAGTA CCTGTAGAAATCTTATGAAA
Product: methylglyoxal synthase
Products: NA
Alternate protein names: MGS
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQEIDLVIFLRD PLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI
Sequences:
>Translated_137_residues MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQEIDLVIFLRD PLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI >Mature_137_residues MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGDQQIGSLIVTQEIDLVIFLRD PLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALDRGELSWREVRKSKSQRI
Specific function: Unknown
COG id: COG1803
COG function: function code G; Methylglyoxal synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylglyoxal synthase family
Homologues:
Organism=Escherichia coli, GI87081809, Length=117, Percent_Identity=45.2991452991453, Blast_Score=120, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MGSA_CLOD6 (Q18B16)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001087645.1 - ProteinModelPortal: Q18B16 - SMR: Q18B16 - STRING: Q18B16 - GeneID: 4914589 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1153 - NMPDR: fig|1496.1.peg.243 - eggNOG: COG1803 - HOGENOM: HBG298005 - OMA: EPQPHDP - ProtClustDB: CLSK2534709 - HAMAP: MF_00549 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 - Gene3D: G3DSA:3.40.50.1380 - PIRSF: PIRSF006614 - SMART: SM00851 - TIGRFAMs: TIGR00160
Pfam domain/function: PF02142 MGS; SSF52335 MGS-like_dom
EC number: =4.2.3.3
Molecular weight: Translated: 15277; Mature: 15277
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS01335 METHYLGLYOXAL_SYNTH
Important sites: ACT_SITE 60-60
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGD CCEEEEECCHHHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHCCCHHHHCCCCCCCC QQIGSLIVTQEIDLVIFLRDPLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALD HHHCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHEEECC RGELSWREVRKSKSQRI CCCCHHHHHHHHHCCCC >Mature Secondary Structure MNIALVAHDQMKNTMVGFCIGYESILKKYGLYATGTTGKRIMDETELNINRLASGPLGGD CCEEEEECCHHHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHCCCHHHHCCCCCCCC QQIGSLIVTQEIDLVIFLRDPLTSQAHETDIQALIRLCDVYHVPIATNLASAEIFIKALD HHHCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHEEECC RGELSWREVRKSKSQRI CCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA