Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is minC

Identifier: 126698744

GI number: 126698744

Start: 1348678

End: 1349361

Strand: Direct

Name: minC

Synonym: CD1149

Alternate gene names: 126698744

Gene position: 1348678-1349361 (Clockwise)

Preceding gene: 126698743

Following gene: 126698745

Centisome position: 31.44

GC content: 30.41

Gene sequence:

>684_bases
ATGTCTTTAAGAGAAATTTGTAGTCAAGAACTAGTAGAGTTCAAGGGTAATAAAAGAGGGATAATAGTAAATATAAAAAG
AGAAGCTCCATTTGAGGAAATACAGGAAAAAATAATAAACAAATTGGAAGCATATGTTGGCTTTTTTAATGGGGCTAAAA
TTAGTAAAATTAATAGTGATTGTTTAACTGACATGGAGATTCTAGAACTTAAAGAAGGAATTACTTCTAGATTTGATGTG
GAATTTGTTGAAGATCAAAAAATTGAAGAAAATAGTAATTTTCCAACAAAATATGTCAATACCCTAAGATCTGGTGAAAA
TATTGAATTTGAAGGTGATGTAGTTATATTGAATGATATGAAACCTGGTTCAAAAGTCCTTTCAAAATCAAATACAGTTG
TTATGGGAGATATAAATGCTGGTGCTAAGGTTGTAGCAGGAGGTAATGTTTTTGTAATGGGTAAAATAGAAGGTTTTGTA
CATGCAGGTGCAGAAGGCAATGAATTTGCATATGTTGTTGCTGGAAATCTTAATCCTAAAATATTACAAATAGCAGATAA
TATTGCAGAAGCTCCAGATGATGAAGAAAATTATGAAAGTGAATCAGAAATTAGCCCAGAAATAGCCTTTGTAAGTAATG
GAAGAATTGTAATCGAAAGCTATTTGTCAAAGTTAGACAAATAG

Upstream 100 bases:

>100_bases
TAGCTCAATCTATGTATAAACTTTAGCTTTATATAGAAAAAATAAAAGGGTTTAAAGCGTATTTGAAGAATATAAATGAT
ATATCACTCTGGAGGTTGTT

Downstream 100 bases:

>100_bases
AAAGAAAAATAGGGGGTAGTATTATGAGCGAAGTTATAGTTATAACATCTGGTAAAGGTGGGGTTGGAAAAACTACTACC
GCAGCAAACTTAGGAACTGC

Product: septum site-determining protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILELKEGITSRFDV
EFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFV
HAGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK

Sequences:

>Translated_227_residues
MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILELKEGITSRFDV
EFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFV
HAGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK
>Mature_226_residues
SLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSDCLTDMEILELKEGITSRFDVE
FVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDMKPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFVH
AGAEGNEFAYVVAGNLNPKILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK

Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization

COG id: COG0850

COG function: function code D; Septum formation inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the minC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MINC_CLOD6 (Q18B13)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001087641.1
- ProteinModelPortal:   Q18B13
- SMR:   Q18B13
- STRING:   Q18B13
- GeneID:   4914585
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD1149
- NMPDR:   fig|1496.1.peg.247
- eggNOG:   COG0850
- HOGENOM:   HBG399077
- OMA:   CVAAFYL
- ProtClustDB:   CLSK2534706
- HAMAP:   MF_00267
- InterPro:   IPR016098
- InterPro:   IPR013033
- InterPro:   IPR005526
- Gene3D:   G3DSA:2.160.20.70
- TIGRFAMs:   TIGR01222

Pfam domain/function: PF03775 MinC_C; SSF63848 MinC_C

EC number: NA

Molecular weight: Translated: 25095; Mature: 24963

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSD
CCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
CLTDMEILELKEGITSRFDVEFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDM
HHCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCEEEEECC
KPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFVHAGAEGNEFAYVVAGNLNPK
CCCHHHHCCCCEEEEEECCCCCEEEECCCEEEEEEECEEEECCCCCCEEEEEEECCCCCH
ILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK
HHEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHCC
>Mature Secondary Structure 
SLREICSQELVEFKGNKRGIIVNIKREAPFEEIQEKIINKLEAYVGFFNGAKISKINSD
CHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
CLTDMEILELKEGITSRFDVEFVEDQKIEENSNFPTKYVNTLRSGENIEFEGDVVILNDM
HHCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCEEECCCEEEEECC
KPGSKVLSKSNTVVMGDINAGAKVVAGGNVFVMGKIEGFVHAGAEGNEFAYVVAGNLNPK
CCCHHHHCCCCEEEEEECCCCCEEEECCCEEEEEEECEEEECCCCCCEEEEEEECCCCCH
ILQIADNIAEAPDDEENYESESEISPEIAFVSNGRIVIESYLSKLDK
HHEEHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA