Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is mreC [H]

Identifier: 126698741

GI number: 126698741

Start: 1344188

End: 1345087

Strand: Direct

Name: mreC [H]

Synonym: CD1146

Alternate gene names: 126698741

Gene position: 1344188-1345087 (Clockwise)

Preceding gene: 126698740

Following gene: 126698742

Centisome position: 31.33

GC content: 30.22

Gene sequence:

>900_bases
TTGGTGATGGCCTTGAGATTTGACAAGAACAAAAATGAGAAAAAAAGGATTAATGTTAAAGTGATAGCAACGGGCGTAGT
TGCTATCACTTTAATTGGAATTGTGGGTATATCAATTGGTAAATTTTCTAGTGGTAGTCCAGTAAATTTAGGAGTAGCTT
CAGATGCTATTACAAGTGTAGGTAAGGGAATAAATGATGGATTTTCTTTTATCAAAAATGGTTTTAAAGATGTAGCAAAT
TTTAAAGATAATTCTAAAAAGGTAAAAAAATTAGAAGAAGAAAATGAAAAACTTAAAAAAAATATGATAGCTTTAAATGC
CAAACTAGATAAAACAGAATCGCTAGAAGAGTTAAAAAAGACACTGAACTTTGTACAAGAAGAGTATAAGGCGACAAGTA
TTTCAGCAAGTGTTGTTGGTAAAAATGATGGAAACTGGTATGAGAGTTTTGTCATAGGTGCAGGAAAAAATTCAGGTGTA
AAAAAAGAAAGTATAGTTATGAATGGTAGTGGATTAGTTGGCATAGTTTATGAGGTTTCCAACAATTATAGTAAGGCAAT
TTCACTATTGGATTCTAAGGCATCTGTAAGCTTTAAACTAGCAAAGGATGCCAATGCTAAAGGTACAATTACTCAAAATA
CTACTTTAGATAATAAAGATAGTTATAATAGTAAAGGATATTTGCAAGGATATATGTTTGACTCATCATATAATGTAATT
CAAGGAGATATAATAACAACATCAGGTCTTGGATTCTTCCCAGATGGTATACCAATTGGCGAAGTTGAAAAAGTGGTTGA
TGATAAAGATAAGTCATTAAAATATGTAGTTGTAAAACCTTATGTTGATTTTAAGAATATAAATGACGTTGTAGTCATAG
AACCAAGAAATATAGGATAA

Upstream 100 bases:

>100_bases
AGAAACACCTCTTGATTGTGTTGCACTTGGAACAGGTAAATCTGTTGAAGACCAAGAAATCTTTGAAAAAGTATTAATGA
TGAATACTAAGAATTAGAAG

Downstream 100 bases:

>100_bases
AGGGGATAAAAACAATGAAAAAAGTTTTACTTTGTCTGTTGGGGATTGTGCTTATGACTATAGAAAATAGTATAACAAAT
TATATAGATATTTTTGGCAT

Product: rod shape-determining protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MVMALRFDKNKNEKKRINVKVIATGVVAITLIGIVGISIGKFSSGSPVNLGVASDAITSVGKGINDGFSFIKNGFKDVAN
FKDNSKKVKKLEEENEKLKKNMIALNAKLDKTESLEELKKTLNFVQEEYKATSISASVVGKNDGNWYESFVIGAGKNSGV
KKESIVMNGSGLVGIVYEVSNNYSKAISLLDSKASVSFKLAKDANAKGTITQNTTLDNKDSYNSKGYLQGYMFDSSYNVI
QGDIITTSGLGFFPDGIPIGEVEKVVDDKDKSLKYVVVKPYVDFKNINDVVVIEPRNIG

Sequences:

>Translated_299_residues
MVMALRFDKNKNEKKRINVKVIATGVVAITLIGIVGISIGKFSSGSPVNLGVASDAITSVGKGINDGFSFIKNGFKDVAN
FKDNSKKVKKLEEENEKLKKNMIALNAKLDKTESLEELKKTLNFVQEEYKATSISASVVGKNDGNWYESFVIGAGKNSGV
KKESIVMNGSGLVGIVYEVSNNYSKAISLLDSKASVSFKLAKDANAKGTITQNTTLDNKDSYNSKGYLQGYMFDSSYNVI
QGDIITTSGLGFFPDGIPIGEVEKVVDDKDKSLKYVVVKPYVDFKNINDVVVIEPRNIG
>Mature_299_residues
MVMALRFDKNKNEKKRINVKVIATGVVAITLIGIVGISIGKFSSGSPVNLGVASDAITSVGKGINDGFSFIKNGFKDVAN
FKDNSKKVKKLEEENEKLKKNMIALNAKLDKTESLEELKKTLNFVQEEYKATSISASVVGKNDGNWYESFVIGAGKNSGV
KKESIVMNGSGLVGIVYEVSNNYSKAISLLDSKASVSFKLAKDANAKGTITQNTTLDNKDSYNSKGYLQGYMFDSSYNVI
QGDIITTSGLGFFPDGIPIGEVEKVVDDKDKSLKYVVVKPYVDFKNINDVVVIEPRNIG

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG1792

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007221
- InterPro:   IPR005223 [H]

Pfam domain/function: PF04085 MreC [H]

EC number: NA

Molecular weight: Translated: 32457; Mature: 32457

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMALRFDKNKNEKKRINVKVIATGVVAITLIGIVGISIGKFSSGSPVNLGVASDAITSV
CEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHEECCCCCCCCEEEECHHHHHHHH
GKGINDGFSFIKNGFKDVANFKDNSKKVKKLEEENEKLKKNMIALNAKLDKTESLEELKK
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHH
TLNFVQEEYKATSISASVVGKNDGNWYESFVIGAGKNSGVKKESIVMNGSGLVGIVYEVS
HHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEEC
NNYSKAISLLDSKASVSFKLAKDANAKGTITQNTTLDNKDSYNSKGYLQGYMFDSSYNVI
CCHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEE
QGDIITTSGLGFFPDGIPIGEVEKVVDDKDKSLKYVVVKPYVDFKNINDVVVIEPRNIG
ECCEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MVMALRFDKNKNEKKRINVKVIATGVVAITLIGIVGISIGKFSSGSPVNLGVASDAITSV
CEEEEEECCCCCCCCEEEEEEEEHHHHHHHHHHHHHHEECCCCCCCCEEEECHHHHHHHH
GKGINDGFSFIKNGFKDVANFKDNSKKVKKLEEENEKLKKNMIALNAKLDKTESLEELKK
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHH
TLNFVQEEYKATSISASVVGKNDGNWYESFVIGAGKNSGVKKESIVMNGSGLVGIVYEVS
HHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEEC
NNYSKAISLLDSKASVSFKLAKDANAKGTITQNTTLDNKDSYNSKGYLQGYMFDSSYNVI
CCHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEE
QGDIITTSGLGFFPDGIPIGEVEKVVDDKDKSLKYVVVKPYVDFKNINDVVVIEPRNIG
ECCEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400225; 1400224; 9384377 [H]