Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698716

Identifier: 126698716

GI number: 126698716

Start: 1321141

End: 1322121

Strand: Direct

Name: 126698716

Synonym: CD1124

Alternate gene names: NA

Gene position: 1321141-1322121 (Clockwise)

Preceding gene: 126698715

Following gene: 126698717

Centisome position: 30.79

GC content: 26.61

Gene sequence:

>981_bases
ATGGGTGATACAAGTAGATTTTATGAGTCTGTAAAAAATAAATATCCGAAATTAAAAGATGGAACTAGGGTTCATCTGTG
GCCAAAAGAAAACATTATAATTGGCCCTATTTATGATGAAGAAGATGGATATAAAAAAAGTATCGGAAATGTGGATAGCT
TAAGTTGGAAGCAAATTGTTATACTGGCTGAATGTGATGGGAAAAATACTACTGACGATATAATAAATATATTATCCAAT
AGATATAGAAATATCCATAATATGAAAGAAAAAGTTATGGAATTTTTTATGTTTTATGAGAATGTATACTTAACGTTTGA
AGATGATATACAGACACTATCAAGTGTATTTGAGATAACAGGAAATAAATCATACATTACTCCTTTGTACTTTACTATAG
AAATAGATGGAGATAATAATACAAATGATTATTTTTCTGAAATCACAAGTTTATTGAACTGCATGTATGAGAAAGGCTGT
AGATTTATAGAGGTTATTGGTGAGGATATTTTAAAAAATAAAAGTATGAGAGAAATATTTCAATATATGTTAGACCATTT
TGATTTAATTGTGGTAACTAAAGATAGTTTTACTATTGATAGAAGCTTAATAAAGGAATTAGATAATTATCGTCATAAAG
TGATATGGAAAGTATATTCAAAAAATGATGATACACGTATTAAATTAAAAGAAGATATAAAAATAACCAGTTTAATAAAA
AGGGGTCACACTGTAGTAAGAGGAGACAGAGAAAAAGCAATAAAAATAGAAGATATGAGGTTTAAAGATACAAAGGAGAG
GTTTTCAAAATATGGAGCAGAGTGGAGTCATTTATATATTTCTTCTGATGGTAGTGTAAAATCTTATTCATTTCAAAAAG
ATAAAAGAATCTATTTAGGCAATATATTTAACAATTCTGTTGAAGAAATTTTCTTAGAAATGCAAAATAAAATTGACAAA
CTAGAAATTGTGTATCAATAG

Upstream 100 bases:

>100_bases
AACATATATAATGACCAATTTTGAATAACTGTTGAATTAATAAAAATAAAGTGCTATTTTTAGCATAGAATATTTAAACT
ATGGGGGGTAGTAAAGAATC

Downstream 100 bases:

>100_bases
GGGGAAAGTTTAAGATTTATAGAAGATTTATAGATTGTTTATTTAAGTTTGTGTCAATAATTATAATGAGGTGAGATTAC
TTGTTAAAATTATTGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MGDTSRFYESVKNKYPKLKDGTRVHLWPKENIIIGPIYDEEDGYKKSIGNVDSLSWKQIVILAECDGKNTTDDIINILSN
RYRNIHNMKEKVMEFFMFYENVYLTFEDDIQTLSSVFEITGNKSYITPLYFTIEIDGDNNTNDYFSEITSLLNCMYEKGC
RFIEVIGEDILKNKSMREIFQYMLDHFDLIVVTKDSFTIDRSLIKELDNYRHKVIWKVYSKNDDTRIKLKEDIKITSLIK
RGHTVVRGDREKAIKIEDMRFKDTKERFSKYGAEWSHLYISSDGSVKSYSFQKDKRIYLGNIFNNSVEEIFLEMQNKIDK
LEIVYQ

Sequences:

>Translated_326_residues
MGDTSRFYESVKNKYPKLKDGTRVHLWPKENIIIGPIYDEEDGYKKSIGNVDSLSWKQIVILAECDGKNTTDDIINILSN
RYRNIHNMKEKVMEFFMFYENVYLTFEDDIQTLSSVFEITGNKSYITPLYFTIEIDGDNNTNDYFSEITSLLNCMYEKGC
RFIEVIGEDILKNKSMREIFQYMLDHFDLIVVTKDSFTIDRSLIKELDNYRHKVIWKVYSKNDDTRIKLKEDIKITSLIK
RGHTVVRGDREKAIKIEDMRFKDTKERFSKYGAEWSHLYISSDGSVKSYSFQKDKRIYLGNIFNNSVEEIFLEMQNKIDK
LEIVYQ
>Mature_325_residues
GDTSRFYESVKNKYPKLKDGTRVHLWPKENIIIGPIYDEEDGYKKSIGNVDSLSWKQIVILAECDGKNTTDDIINILSNR
YRNIHNMKEKVMEFFMFYENVYLTFEDDIQTLSSVFEITGNKSYITPLYFTIEIDGDNNTNDYFSEITSLLNCMYEKGCR
FIEVIGEDILKNKSMREIFQYMLDHFDLIVVTKDSFTIDRSLIKELDNYRHKVIWKVYSKNDDTRIKLKEDIKITSLIKR
GHTVVRGDREKAIKIEDMRFKDTKERFSKYGAEWSHLYISSDGSVKSYSFQKDKRIYLGNIFNNSVEEIFLEMQNKIDKL
EIVYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38638; Mature: 38507

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTSRFYESVKNKYPKLKDGTRVHLWPKENIIIGPIYDEEDGYKKSIGNVDSLSWKQIV
CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHCCCCCCCCEEEEE
ILAECDGKNTTDDIINILSNRYRNIHNMKEKVMEFFMFYENVYLTFEDDIQTLSSVFEIT
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHC
GNKSYITPLYFTIEIDGDNNTNDYFSEITSLLNCMYEKGCRFIEVIGEDILKNKSMREIF
CCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH
QYMLDHFDLIVVTKDSFTIDRSLIKELDNYRHKVIWKVYSKNDDTRIKLKEDIKITSLIK
HHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHEEEEEEECCCCCCEEEECCCCHHHHHHH
RGHTVVRGDREKAIKIEDMRFKDTKERFSKYGAEWSHLYISSDGSVKSYSFQKDKRIYLG
CCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCEEEEE
NIFNNSVEEIFLEMQNKIDKLEIVYQ
CCCCCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
GDTSRFYESVKNKYPKLKDGTRVHLWPKENIIIGPIYDEEDGYKKSIGNVDSLSWKQIV
CCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCHHHHCCCCCCCCEEEEE
ILAECDGKNTTDDIINILSNRYRNIHNMKEKVMEFFMFYENVYLTFEDDIQTLSSVFEIT
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHC
GNKSYITPLYFTIEIDGDNNTNDYFSEITSLLNCMYEKGCRFIEVIGEDILKNKSMREIF
CCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH
QYMLDHFDLIVVTKDSFTIDRSLIKELDNYRHKVIWKVYSKNDDTRIKLKEDIKITSLIK
HHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHEEEEEEECCCCCCEEEECCCCHHHHHHH
RGHTVVRGDREKAIKIEDMRFKDTKERFSKYGAEWSHLYISSDGSVKSYSFQKDKRIYLG
CCCEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCEEEEE
NIFNNSVEEIFLEMQNKIDKLEIVYQ
CCCCCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA