Click here to switch to the map view.

The map label for this gene is sgcB [H]

Identifier: 126698670

GI number: 126698670

Start: 1275430

End: 1275705

Strand: Direct

Name: sgcB [H]

Synonym: CD1083

Alternate gene names: 126698670

Gene position: 1275430-1275705 (Clockwise)

Preceding gene: 126698669

Following gene: 126698671

Centisome position: 29.73

GC content: 30.8

Gene sequence:

>276_bases
ATGAAAAAAATATTAGTAGCCTGTGGAGCAGGAATCGCAACATCAACAATAGTTTGTGACAGAGTAGAAAGATTGGTTAA
AGAAAATAATATACAAGCAGAAGTTGAGCAATGTAAAATTGCTGAATGTTCAACAAAACAAGAAGGTGCTGATTTAATCG
TATCTACTACTATACTACCAACAACTTATGATATACCTACAATAAAGGCAACAGGATATATAACAGGTATAAATACAACA
GCATTAGATAAAAAGATATTAAATGCATTGAAGTAG

Upstream 100 bases:

>100_bases
ATATAAAATGATATAATTATTTATATAAATAAAGATATAAGAAATTTATCAATTTTATTTTGAGTTATAAAATATTAAAG
AAATTGTAGGAGGACAATAT

Downstream 100 bases:

>100_bases
TTTTGTATTTATAAAAAAAATTTAGTATTAAATATAGAGTTGTATCTTTATAAAATTTTAAATATAGAGATATAGCTCTT
TTTATGTTGTTTCAAGTATA

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: Putative PTS system EIIB component [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKKILVACGAGIATSTIVCDRVERLVKENNIQAEVEQCKIAECSTKQEGADLIVSTTILPTTYDIPTIKATGYITGINTT
ALDKKILNALK

Sequences:

>Translated_91_residues
MKKILVACGAGIATSTIVCDRVERLVKENNIQAEVEQCKIAECSTKQEGADLIVSTTILPTTYDIPTIKATGYITGINTT
ALDKKILNALK
>Mature_91_residues
MKKILVACGAGIATSTIVCDRVERLVKENNIQAEVEQCKIAECSTKQEGADLIVSTTILPTTYDIPTIKATGYITGINTT
ALDKKILNALK

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]

COG id: COG3414

COG function: function code G; Phosphotransferase system, galactitol-specific IIB component

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI87082416, Length=86, Percent_Identity=40.6976744186046, Blast_Score=70, Evalue=2e-14,
Organism=Escherichia coli, GI1788409, Length=91, Percent_Identity=37.3626373626374, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013011
- InterPro:   IPR003501 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 9769; Mature: 9769

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVACGAGIATSTIVCDRVERLVKENNIQAEVEQCKIAECSTKQEGADLIVSTTILP
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECC
TTYDIPTIKATGYITGINTTALDKKILNALK
CCCCCCCEEECEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKILVACGAGIATSTIVCDRVERLVKENNIQAEVEQCKIAECSTKQEGADLIVSTTILP
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECC
TTYDIPTIKATGYITGINTTALDKKILNALK
CCCCCCCEEECEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]