| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is levE [H]
Identifier: 126698663
GI number: 126698663
Start: 1269131
End: 1269601
Strand: Direct
Name: levE [H]
Synonym: CD1076
Alternate gene names: 126698663
Gene position: 1269131-1269601 (Clockwise)
Preceding gene: 126698662
Following gene: 126698664
Centisome position: 29.58
GC content: 29.51
Gene sequence:
>471_bases ATGATTAAATTAGTAAGAGTAGACCACAGACTTATACATGGACAAGTAGCATTTACATGGACAAAGTTTTTAAGTACAGA CTGTATATTGATAGCAAGTGATGACTTATTAAAAGATGAATTGAGAATGGCAGGACTTAAAATGGCTAAACCATCTAATG TTAAGTTAGTAATGAAAAGCATAGCAGATTCTATAAAAGCACTTAACTCAGGTGTTACTGATAAATACAACTTATTGATA CTTTGTGAATCTGTAGAAGATGTTTATAGACTTGCTAAAGAGGTAAAAGCTATTAAATCTATAAACCTTGGTGGAACAAA ATCAGATGATAATCGTGAAAATATATCTAAAGCAGTGCATGTATCAAAAGATGATATAAAGATGATTAAAGAGTTAGATT CAGAAGGCGTAAATGTATTTGTACAATTAGTTCCTGATGATGATGCTACAAATGTAATGAAATTAATATAA
Upstream 100 bases:
>100_bases GAAGTTACTTTAAAGATAATTACAAAGATTTTGGGGATGTTAGTGTAGAACACGTAAAAACATTCATGGATGAAATCAAA AAAATTAGGGAGGAATTATA
Downstream 100 bases:
>100_bases TTTTAGGGGGATGAAAATGGAATTTACACAAGTTATTTTGATAACTCTAATTGCATTCTTTGCATATATGCATAGTTTTG TAGGTTCTACAATGCATAAT
Product: PTS system transporter subunit IIB
Products: NA
Alternate protein names: EIIB-Fru; PTS system fructose-specific EIIB component; p18 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MIKLVRVDHRLIHGQVAFTWTKFLSTDCILIASDDLLKDELRMAGLKMAKPSNVKLVMKSIADSIKALNSGVTDKYNLLI LCESVEDVYRLAKEVKAIKSINLGGTKSDDNRENISKAVHVSKDDIKMIKELDSEGVNVFVQLVPDDDATNVMKLI
Sequences:
>Translated_156_residues MIKLVRVDHRLIHGQVAFTWTKFLSTDCILIASDDLLKDELRMAGLKMAKPSNVKLVMKSIADSIKALNSGVTDKYNLLI LCESVEDVYRLAKEVKAIKSINLGGTKSDDNRENISKAVHVSKDDIKMIKELDSEGVNVFVQLVPDDDATNVMKLI >Mature_156_residues MIKLVRVDHRLIHGQVAFTWTKFLSTDCILIASDDLLKDELRMAGLKMAKPSNVKLVMKSIADSIKALNSGVTDKYNLLI LCESVEDVYRLAKEVKAIKSINLGGTKSDDNRENISKAVHVSKDDIKMIKELDSEGVNVFVQLVPDDDATNVMKLI
Specific function: LevD and levE act as negative regulators of the levanase operon. They may be involved in a PTS-mediated phosphorylation of a regulator [H]
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI87082217, Length=155, Percent_Identity=29.0322580645161, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI1788120, Length=156, Percent_Identity=32.0512820512821, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1789527, Length=152, Percent_Identity=25, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 17373; Mature: 17373
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLVRVDHRLIHGQVAFTWTKFLSTDCILIASDDLLKDELRMAGLKMAKPSNVKLVMKS CEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHH IADSIKALNSGVTDKYNLLILCESVEDVYRLAKEVKAIKSINLGGTKSDDNRENISKAVH HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VSKDDIKMIKELDSEGVNVFVQLVPDDDATNVMKLI CCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCC >Mature Secondary Structure MIKLVRVDHRLIHGQVAFTWTKFLSTDCILIASDDLLKDELRMAGLKMAKPSNVKLVMKS CEEEEEECHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHH IADSIKALNSGVTDKYNLLILCESVEDVYRLAKEVKAIKSINLGGTKSDDNRENISKAVH HHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VSKDDIKMIKELDSEGVNVFVQLVPDDDATNVMKLI CCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2117666; 9141695; 9384377; 9551099 [H]