| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698514
Identifier: 126698514
GI number: 126698514
Start: 1107557
End: 1108363
Strand: Direct
Name: 126698514
Synonym: CD0935
Alternate gene names: NA
Gene position: 1107557-1108363 (Clockwise)
Preceding gene: 126698513
Following gene: 126698515
Centisome position: 25.82
GC content: 28.5
Gene sequence:
>807_bases ATGAATAAGGTTTTGAATTGGCCAGGTGCTAAATGGAGCATGTCAAAAAACATAGTAGGTATACTTCCAAAACATAATAT ATATTTAGAACCATATTTTGGGAGTGGAGCAGTATTTTTTAATAAGAAAGCATGTAACACAGAGATATTGAATGATGCAG ATAAACAAATTGTAAATTTATTTAAATGTATAAGAGATAATCCAAATGAATTAATGAATGCTATATATTTTACTCCATAT GCTAGAGATGAATATATGAATTGTAATATCCTTGAAACTGATAATGATATAGAAAAAGCTAGAAAATTTATAATAAGAAC GAATATGGCAAGAGGAGGAATACAAAATTATAAAACAGGTTGGAAACACACAGGTCCTAAAGAAAGTAAAAAATGCTTTC AAAAAGTTGTGGGAAAATGGAATAAGTTACCTAAAATTATTTTAGATACAGCTATAAGGTTAAAAGATGCAGAAATAGAA AATAGAGATGCAGTAGAGTTAATAAAAAAATACAACAAAACTGATTGTTTAGTATATGCAGACCCTCCTTATTTGCTAAA AACAAGAAGTCAGAAAATGTACAATATCGAGATGGAAACAGAAGAAGAACATGAAGAGTTACTAAAAGCACTTTTAAATC ACGCTGGTCCTGTTGCAATAAGTGGATATGAATCTGATTTATATAATTGTATGCTTAAGAATTGGAACAAATCAGAATTT AAATCACATGCAGAACAAGGCAAATTAAGAAAAGAAATGTTGTGGACCAACTTTGAAACTACTAAACAACTTAGTTTGTT TAAATAA
Upstream 100 bases:
>100_bases GAAGATGTAATTGGTGTGGCAAGTTGTTTTATCTTGAGGAAAAATCTAAGGAGGCTTATTGTTGTAAGGAATGTAGGAAG AAAGCTAAGAAGGTGAAAAA
Downstream 100 bases:
>100_bases ATAGGAGAGAGTAATGAGAGTTAATTTTACAATAGATGGAGAACCAGTTGGCAAAGAAAGACCTAGATTTAATTTGGCTA CTAAAAGGACCTATACACCT
Product: phage modification methylase
Products: NA
Alternate protein names: DNA Adenine Methylase; Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA-Methyltransferase; DNA Adenine Methyltransferase; N6 Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; Adenine Specific DNA Methyltransferase; Phage Methylase; Type II DNA Methyltransferase; DNA Adenine Methylase Subfamily; Methylase; Phage Associated Type II DNA-Methyltransferase; Phage-Related Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; DNA Methyltransferase; Prophage DNA Methylase
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNKVLNWPGAKWSMSKNIVGILPKHNIYLEPYFGSGAVFFNKKACNTEILNDADKQIVNLFKCIRDNPNELMNAIYFTPY ARDEYMNCNILETDNDIEKARKFIIRTNMARGGIQNYKTGWKHTGPKESKKCFQKVVGKWNKLPKIILDTAIRLKDAEIE NRDAVELIKKYNKTDCLVYADPPYLLKTRSQKMYNIEMETEEEHEELLKALLNHAGPVAISGYESDLYNCMLKNWNKSEF KSHAEQGKLRKEMLWTNFETTKQLSLFK
Sequences:
>Translated_268_residues MNKVLNWPGAKWSMSKNIVGILPKHNIYLEPYFGSGAVFFNKKACNTEILNDADKQIVNLFKCIRDNPNELMNAIYFTPY ARDEYMNCNILETDNDIEKARKFIIRTNMARGGIQNYKTGWKHTGPKESKKCFQKVVGKWNKLPKIILDTAIRLKDAEIE NRDAVELIKKYNKTDCLVYADPPYLLKTRSQKMYNIEMETEEEHEELLKALLNHAGPVAISGYESDLYNCMLKNWNKSEF KSHAEQGKLRKEMLWTNFETTKQLSLFK >Mature_268_residues MNKVLNWPGAKWSMSKNIVGILPKHNIYLEPYFGSGAVFFNKKACNTEILNDADKQIVNLFKCIRDNPNELMNAIYFTPY ARDEYMNCNILETDNDIEKARKFIIRTNMARGGIQNYKTGWKHTGPKESKKCFQKVVGKWNKLPKIILDTAIRLKDAEIE NRDAVELIKKYNKTDCLVYADPPYLLKTRSQKMYNIEMETEEEHEELLKALLNHAGPVAISGYESDLYNCMLKNWNKSEF KSHAEQGKLRKEMLWTNFETTKQLSLFK
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31265; Mature: 31265
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVLNWPGAKWSMSKNIVGILPKHNIYLEPYFGSGAVFFNKKACNTEILNDADKQIVNL CCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCEEEECCCCCCHHHHCHHHHHHHHH FKCIRDNPNELMNAIYFTPYARDEYMNCNILETDNDIEKARKFIIRTNMARGGIQNYKTG HHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCC WKHTGPKESKKCFQKVVGKWNKLPKIILDTAIRLKDAEIENRDAVELIKKYNKTDCLVYA CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEC DPPYLLKTRSQKMYNIEMETEEEHEELLKALLNHAGPVAISGYESDLYNCMLKNWNKSEF CCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHH KSHAEQGKLRKEMLWTNFETTKQLSLFK HHHHHHHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure MNKVLNWPGAKWSMSKNIVGILPKHNIYLEPYFGSGAVFFNKKACNTEILNDADKQIVNL CCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCEEEECCCCCCHHHHCHHHHHHHHH FKCIRDNPNELMNAIYFTPYARDEYMNCNILETDNDIEKARKFIIRTNMARGGIQNYKTG HHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCHHHCCCC WKHTGPKESKKCFQKVVGKWNKLPKIILDTAIRLKDAEIENRDAVELIKKYNKTDCLVYA CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEC DPPYLLKTRSQKMYNIEMETEEEHEELLKALLNHAGPVAISGYESDLYNCMLKNWNKSEF CCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHH KSHAEQGKLRKEMLWTNFETTKQLSLFK HHHHHHHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA