Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698498

Identifier: 126698498

GI number: 126698498

Start: 1100713

End: 1101063

Strand: Direct

Name: 126698498

Synonym: CD0921

Alternate gene names: NA

Gene position: 1100713-1101063 (Clockwise)

Preceding gene: 126698497

Following gene: 126698499

Centisome position: 25.66

GC content: 27.64

Gene sequence:

>351_bases
ATGTTGGGAAAGACAGGAAAAAATAATATTAGTGTTTGTTATCAATGTAGAAATGAAGATATAAGCGAAGATGCTAGATA
TTGTAAGATTTGTGGAATAGGGTTAAGAGTTATGGAATTAGTGAGTGTTTTTAACTTTGAAACAGAAGAAAAAGAATTTT
CATTTTTAACAGGCAAAGAATGTCTTATAGATTTTGGAGATTTAAGAGAAGGCAATATGTGTAAATTATTCTTTGAAAAT
TCAGAATTAAGAATTATTGGAGTAGAAAATATTTATCAAGATGAAAGAGGTATATTTATTGAAGCTGGTGAGTGTAGCTA
TGAAATAATATTTAAAGATTTGGAGTGGTAG

Upstream 100 bases:

>100_bases
AAAGAGAAATGTTGTGGTTTAAGATATTGCATTTATCAGCAGTTGTAGCAAAAATAATGCAATATAAAATGTTAGGTATT
TCAAAATGAGGAGAGCTGAA

Downstream 100 bases:

>100_bases
AATATGGCTAAAATTTGGGTAGATGCAGGAACATTTTTAGAAAAAACTATTGATATAGAAGATATGTTTGAGCTTAATTT
AAGAAAAGTAAGAAAAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKECLIDFGDLREGNMCKLFFEN
SELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW

Sequences:

>Translated_116_residues
MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKECLIDFGDLREGNMCKLFFEN
SELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW
>Mature_116_residues
MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKECLIDFGDLREGNMCKLFFEN
SELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13483; Mature: 13483

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKE
CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC
CLIDFGDLREGNMCKLFFENSELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW
CEEECCCCCCCCEEEEEEECCCEEEEECHHEEECCCCEEEECCCCEEEEEEEECCC
>Mature Secondary Structure
MLGKTGKNNISVCYQCRNEDISEDARYCKICGIGLRVMELVSVFNFETEEKEFSFLTGKE
CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC
CLIDFGDLREGNMCKLFFENSELRIIGVENIYQDERGIFIEAGECSYEIIFKDLEW
CEEECCCCCCCCEEEEEEECCCEEEEECHHEEECCCCEEEECCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA