| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is modB [H]
Identifier: 126698447
GI number: 126698447
Start: 1046780
End: 1047463
Strand: Direct
Name: modB [H]
Synonym: CD0870
Alternate gene names: 126698447
Gene position: 1046780-1047463 (Clockwise)
Preceding gene: 126698446
Following gene: 126698448
Centisome position: 24.4
GC content: 33.77
Gene sequence:
>684_bases ATGGGAACAGATTGGTCACCCTTATGGATATCACTTAAGACATCTATTTTGTCAACAATAATAACTTTTGTAATAGGAAT ATTTGTGTCATATATTATGGCTAACTATAGAGGTAAGTGGAAGGGTCTTATAGATGGACTATTTACACTTCCACTAATTT TGCCACCAACAGTTGTAGGTTTCTTTTTATTATTACTATGTGGGAAGAATGGATTTATAGGAAAGTTTTTATTAAATTTC GATAGGACTTTAATATTTAGTTGGACAGCAACTGTAATTTCAGCAGTAGTGGTGTCTTTTCCTATGATGTATAGAACTTC AAGGTCAGCTTTTGAACAGATTGATAATAATATGCTGTCAGCTGCTAGAACATTAGGTCTTAATGAATGGAAAGTATTTT TTAAGATTGCAGTTCCATTAGCATGGCCTGGAATAATTGGTGGATTGGTGCTGTCGTTTGCCAGAGCTCTTGGAGAATTT GGTGCTACACTTATGATAGCTGGAAATATACCTGGAAAAACTCAAACTATGCCAATAGCTATATTTTTTGCTGTTGAAGG CGGAGATATGAATAAAGCTATGATGTGGGTTATGATTATTGTAGCAATATCTATAGCAATGATTTTATTACTAAATTATT GGTCGGAATTTCAGCAGAAAATTATAGGAAAGAGGTGTGGATAG
Upstream 100 bases:
>100_bases ATGAAAATTGAAAATAATTGTGTATTATAATAAAATGGAAATAGTGAAATTAATAGAGTTATTAGTTTCACTATTTCCAT TTAAAATTAAGGAGGGAAAG
Downstream 100 bases:
>100_bases TTGAGCTTATACGTGGATATTGAAAAAGATTTATCCTCTTTTAAACTAAAGGTAGAAATTAAACAAGAAAAAGGTACTCT GGGTTTTTTGGGAGAATCTG
Product: molybdenum ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGTDWSPLWISLKTSILSTIITFVIGIFVSYIMANYRGKWKGLIDGLFTLPLILPPTVVGFFLLLLCGKNGFIGKFLLNF DRTLIFSWTATVISAVVVSFPMMYRTSRSAFEQIDNNMLSAARTLGLNEWKVFFKIAVPLAWPGIIGGLVLSFARALGEF GATLMIAGNIPGKTQTMPIAIFFAVEGGDMNKAMMWVMIIVAISIAMILLLNYWSEFQQKIIGKRCG
Sequences:
>Translated_227_residues MGTDWSPLWISLKTSILSTIITFVIGIFVSYIMANYRGKWKGLIDGLFTLPLILPPTVVGFFLLLLCGKNGFIGKFLLNF DRTLIFSWTATVISAVVVSFPMMYRTSRSAFEQIDNNMLSAARTLGLNEWKVFFKIAVPLAWPGIIGGLVLSFARALGEF GATLMIAGNIPGKTQTMPIAIFFAVEGGDMNKAMMWVMIIVAISIAMILLLNYWSEFQQKIIGKRCG >Mature_226_residues GTDWSPLWISLKTSILSTIITFVIGIFVSYIMANYRGKWKGLIDGLFTLPLILPPTVVGFFLLLLCGKNGFIGKFLLNFD RTLIFSWTATVISAVVVSFPMMYRTSRSAFEQIDNNMLSAARTLGLNEWKVFFKIAVPLAWPGIIGGLVLSFARALGEFG ATLMIAGNIPGKTQTMPIAIFFAVEGGDMNKAMMWVMIIVAISIAMILLLNYWSEFQQKIIGKRCG
Specific function: could be part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=227, Percent_Identity=43.6123348017621, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1788764, Length=216, Percent_Identity=32.4074074074074, Blast_Score=123, Evalue=9e-30, Organism=Escherichia coli, GI87082099, Length=174, Percent_Identity=27.5862068965517, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787369, Length=172, Percent_Identity=27.3255813953488, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25155; Mature: 25023
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDWSPLWISLKTSILSTIITFVIGIFVSYIMANYRGKWKGLIDGLFTLPLILPPTVVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH FFLLLLCGKNGFIGKFLLNFDRTLIFSWTATVISAVVVSFPMMYRTSRSAFEQIDNNMLS HHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTLGLNEWKVFFKIAVPLAWPGIIGGLVLSFARALGEFGATLMIAGNIPGKTQTMPIA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEE IFFAVEGGDMNKAMMWVMIIVAISIAMILLLNYWSEFQQKIIGKRCG EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GTDWSPLWISLKTSILSTIITFVIGIFVSYIMANYRGKWKGLIDGLFTLPLILPPTVVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH FFLLLLCGKNGFIGKFLLNFDRTLIFSWTATVISAVVVSFPMMYRTSRSAFEQIDNNMLS HHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTLGLNEWKVFFKIAVPLAWPGIIGGLVLSFARALGEFGATLMIAGNIPGKTQTMPIA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEE IFFAVEGGDMNKAMMWVMIIVAISIAMILLLNYWSEFQQKIIGKRCG EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]