Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698357

Identifier: 126698357

GI number: 126698357

Start: 947930

End: 948772

Strand: Direct

Name: 126698357

Synonym: CD0777

Alternate gene names: NA

Gene position: 947930-948772 (Clockwise)

Preceding gene: 126698356

Following gene: 126698358

Centisome position: 22.09

GC content: 33.81

Gene sequence:

>843_bases
ATGAAAGAAAAAGCAGGGATTAGAAATGCCATAATAGCAGCCTTTATAATCACAATATTGGCAGAATTAATTGGACCTAT
TTCATTTAAAGTTATGGGAATTAATGTAACTTTACTTAGTATACTATGGGCTATATTCATAGGAATGGCTGTTTCTCCTC
ATTTATTAGGGAGAGTTATACCAGCCTTAAAAAAGTTTATAGGGGATAATGAAATAAATGTATCTCCATATTTATTATCT
TTGACACTATATCCATTAGGGATAATGTTTGGAATTAATGCAGGACCTAAAGTTGGTATATTACTTCAAGCAGGACCAGC
ACTTTTATTACAAGAATTTGGTCATATGGGTACAATGTTGATAGCATTGCCTGTTGGAGTAGCATTAGGTCTTGGAAGAA
GTGCATTAGGTGGTACTTTTTCATTATGTCGTGACACAGCACTAGGAATTATTGGAGATAAGTATGGATTAAACTCACCA
GAAGGTATAGGAACACTAGGAACTTACATAAGTGGTAGTATATTTGGAACATTATTATTTTCATTTTTAGCACCAGTGGG
TGTACTTTTAGGATTTCATCCATATGCTTTAGCAATGGCATCAGGAATGGGTAGTGGTTCAATGATGGGAGCTGCAACAG
CATCATTAATGAATACGGTTCCACAAATGTCAGAGCAGATTTTAGCATATTCAGCTACTAGTGGATTGATTACAGCTGTT
ACTGGAATATATATAGAATTATTCTTATCTTTACCAGTAGCCAACTACTATTATAGCAAAGTAGCTCCAGTTATTGAAAG
ATTTAGAGGAAGAAAAACAAGAAGAACAAGTAATAAATTGTAA

Upstream 100 bases:

>100_bases
GAATAAATATATATTATACATTATCAATGATAGGTTATATAATAAAATCACTAACAATTATATTATAAGAAAATTATAAA
AATTACAAGGAGGTATAGAA

Downstream 100 bases:

>100_bases
AGGAGGATATATATATGGAAAAAACTTTTAAGACTATTATGGAGCAGATAAAAATAGTATTGTTTATATATATTATTATT
TGCTTTGGACAAATGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKEKAGIRNAIIAAFIITILAELIGPISFKVMGINVTLLSILWAIFIGMAVSPHLLGRVIPALKKFIGDNEINVSPYLLS
LTLYPLGIMFGINAGPKVGILLQAGPALLLQEFGHMGTMLIALPVGVALGLGRSALGGTFSLCRDTALGIIGDKYGLNSP
EGIGTLGTYISGSIFGTLLFSFLAPVGVLLGFHPYALAMASGMGSGSMMGAATASLMNTVPQMSEQILAYSATSGLITAV
TGIYIELFLSLPVANYYYSKVAPVIERFRGRKTRRTSNKL

Sequences:

>Translated_280_residues
MKEKAGIRNAIIAAFIITILAELIGPISFKVMGINVTLLSILWAIFIGMAVSPHLLGRVIPALKKFIGDNEINVSPYLLS
LTLYPLGIMFGINAGPKVGILLQAGPALLLQEFGHMGTMLIALPVGVALGLGRSALGGTFSLCRDTALGIIGDKYGLNSP
EGIGTLGTYISGSIFGTLLFSFLAPVGVLLGFHPYALAMASGMGSGSMMGAATASLMNTVPQMSEQILAYSATSGLITAV
TGIYIELFLSLPVANYYYSKVAPVIERFRGRKTRRTSNKL
>Mature_280_residues
MKEKAGIRNAIIAAFIITILAELIGPISFKVMGINVTLLSILWAIFIGMAVSPHLLGRVIPALKKFIGDNEINVSPYLLS
LTLYPLGIMFGINAGPKVGILLQAGPALLLQEFGHMGTMLIALPVGVALGLGRSALGGTFSLCRDTALGIIGDKYGLNSP
EGIGTLGTYISGSIFGTLLFSFLAPVGVLLGFHPYALAMASGMGSGSMMGAATASLMNTVPQMSEQILAYSATSGLITAV
TGIYIELFLSLPVANYYYSKVAPVIERFRGRKTRRTSNKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29461; Mature: 29461

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKAGIRNAIIAAFIITILAELIGPISFKVMGINVTLLSILWAIFIGMAVSPHLLGRVI
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH
PALKKFIGDNEINVSPYLLSLTLYPLGIMFGINAGPKVGILLQAGPALLLQEFGHMGTML
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCHHHHH
IALPVGVALGLGRSALGGTFSLCRDTALGIIGDKYGLNSPEGIGTLGTYISGSIFGTLLF
HHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SFLAPVGVLLGFHPYALAMASGMGSGSMMGAATASLMNTVPQMSEQILAYSATSGLITAV
HHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TGIYIELFLSLPVANYYYSKVAPVIERFRGRKTRRTSNKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MKEKAGIRNAIIAAFIITILAELIGPISFKVMGINVTLLSILWAIFIGMAVSPHLLGRVI
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH
PALKKFIGDNEINVSPYLLSLTLYPLGIMFGINAGPKVGILLQAGPALLLQEFGHMGTML
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCHHHHH
IALPVGVALGLGRSALGGTFSLCRDTALGIIGDKYGLNSPEGIGTLGTYISGSIFGTLLF
HHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SFLAPVGVLLGFHPYALAMASGMGSGSMMGAATASLMNTVPQMSEQILAYSATSGLITAV
HHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TGIYIELFLSLPVANYYYSKVAPVIERFRGRKTRRTSNKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA