| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is cshA [H]
Identifier: 126698341
GI number: 126698341
Start: 932734
End: 934347
Strand: Direct
Name: cshA [H]
Synonym: CD0761
Alternate gene names: 126698341
Gene position: 932734-934347 (Clockwise)
Preceding gene: 126698340
Following gene: 126698342
Centisome position: 21.74
GC content: 31.47
Gene sequence:
>1614_bases ATGAATATAACAAAGTTTGAAGATTTACCAATAAGTGAGGGAATAAAAAAAGCTATAGCTGAAATGGGGTTTGAAGAACC ATCTCCTATACAAGCACAGTCTATACCTGCGATTTTGTCAGGTAAAGACGTTATAGGACAAGCTCAAACTGGTACGGGAA AAACAGCTGCTTTTAGTATCCCTATACTAGAAACAATAGACCCAAATAATAGAAGTTTACAAGCTGTAGTGCTTTGTCCA ACAAGAGAACTGGCAATACAAGTATCAACAGAAATAAGAAAGTTAGCTAAGTATTCGCACGGAATAAAGACATTACCTAT ATATGGTGGTCAGCCAATAGATAGACAAATAAAATCTCTAAAGAGTGGTGTGCAAGTTGTAATAGGTACACCAGGACGTA CAATAGACCATATCAATCGTAAAACATTAAAGATGGATAATGTAAAAATGATTATATTAGATGAAGCAGATGAAATGCTA GATATGGGATTTAGAGAAGATATAGAAATGATTTTAAGTAAGATTCCAGAAGAAAGACAAACAACTTTCTTTTCAGCTAC TATGCCAAGAGGAATTTTGGAATTAACTAAGAGATATCAAAAAGACCCAGAGCATATAAAAGTTGTTAGAAAAGAACTTA CAGTTTCAAATACAAAGCAATACTATATAGAAACTAGGTCATCAAATAAATTAGAAGTATTATGTAGATTAGTAGATGTA TATGACCCTAAACTATCTGTTGTTTTCTGTAATACTAAGAGAAAAGCAGATGAATTGGTAGGAGATTTACAAGCAAGAGG ATATTTTGCAGATGCATTACATGGTGACTTAAAACAGACTCAAAGAGATATAGTAATGGATAAGTTTAGAAATGGTACAA TAGATATACTTGTTGCTACTGATGTTGCAGCTAGAGGTATAGATGTTGATGATGTTGAATGTGTATTCAACTATGACTTA CCACAAGATGAAGAGTATTACGTTCATAGAATTGGTAGAACTGGTCGTGCTGGTAGAGAAGGTATGTCATTTACTTTTGT ATTTGGAAAAGAAATGAGAAAGATGAAAGATATAGAAAGATATACTAAATCTAAACTAATAAAGCATAATATACCAACAA TAACTGATGTTGAAGAGAAAAAAGTAGGTACTTTCTTTGCACAAGTTAAACAAACTATAGAAGAAGGTCACTTAACTAAA CAATTACAATGGTTAGAAGGTTTCTGTAATGATGAAGATTATGCAATGGTTGATATAGCTGCTGCACTTGTAAAACTATC TCTAGGTGAAGAAATGAAAGAAGAAATAATAGAAGAAAAACCTAGAAGAGAGCGTGGAGATAGAAAAGGTGGTACTGGAG CTAAAGATGGTATGATTAGATTATTTATCAATATTGGTAGAAATCAAAGAGTACAAGCAAAAGATATAGTTGGTGCTATA GCTGGAGAAGTTGGAATACCAGGTAAAGTAGTAGGTACTATAGATATATATGATAAGTATACTTTTGTTGAAATACCTAA AAAAGATGCAAAAACAGTAATTGAAAAGATGAAAGATATTAAGATAAAAGGTAATAAGATTAATATAGAAAAAGCAAATA AGAAGAAAAAATAA
Upstream 100 bases:
>100_bases TATTATTTAACTATACTGTTTAAAATATTAATTGCAGAATATCCTAAAAAAGTATATAATGGATAGGTTAAGATTAATTG ATAACGGAGAGGAATAATAT
Downstream 100 bases:
>100_bases CGTATAGTATACAAAACTATAATTAGAAAATATATAAAATAATATATTGGATATTTAAAAAGCCTGATGTGTTTTCAAAA CAGATAGTAGATAATCTGTA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MNITKFEDLPISEGIKKAIAEMGFEEPSPIQAQSIPAILSGKDVIGQAQTGTGKTAAFSIPILETIDPNNRSLQAVVLCP TRELAIQVSTEIRKLAKYSHGIKTLPIYGGQPIDRQIKSLKSGVQVVIGTPGRTIDHINRKTLKMDNVKMIILDEADEML DMGFREDIEMILSKIPEERQTTFFSATMPRGILELTKRYQKDPEHIKVVRKELTVSNTKQYYIETRSSNKLEVLCRLVDV YDPKLSVVFCNTKRKADELVGDLQARGYFADALHGDLKQTQRDIVMDKFRNGTIDILVATDVAARGIDVDDVECVFNYDL PQDEEYYVHRIGRTGRAGREGMSFTFVFGKEMRKMKDIERYTKSKLIKHNIPTITDVEEKKVGTFFAQVKQTIEEGHLTK QLQWLEGFCNDEDYAMVDIAAALVKLSLGEEMKEEIIEEKPRRERGDRKGGTGAKDGMIRLFINIGRNQRVQAKDIVGAI AGEVGIPGKVVGTIDIYDKYTFVEIPKKDAKTVIEKMKDIKIKGNKINIEKANKKKK
Sequences:
>Translated_537_residues MNITKFEDLPISEGIKKAIAEMGFEEPSPIQAQSIPAILSGKDVIGQAQTGTGKTAAFSIPILETIDPNNRSLQAVVLCP TRELAIQVSTEIRKLAKYSHGIKTLPIYGGQPIDRQIKSLKSGVQVVIGTPGRTIDHINRKTLKMDNVKMIILDEADEML DMGFREDIEMILSKIPEERQTTFFSATMPRGILELTKRYQKDPEHIKVVRKELTVSNTKQYYIETRSSNKLEVLCRLVDV YDPKLSVVFCNTKRKADELVGDLQARGYFADALHGDLKQTQRDIVMDKFRNGTIDILVATDVAARGIDVDDVECVFNYDL PQDEEYYVHRIGRTGRAGREGMSFTFVFGKEMRKMKDIERYTKSKLIKHNIPTITDVEEKKVGTFFAQVKQTIEEGHLTK QLQWLEGFCNDEDYAMVDIAAALVKLSLGEEMKEEIIEEKPRRERGDRKGGTGAKDGMIRLFINIGRNQRVQAKDIVGAI AGEVGIPGKVVGTIDIYDKYTFVEIPKKDAKTVIEKMKDIKIKGNKINIEKANKKKK >Mature_537_residues MNITKFEDLPISEGIKKAIAEMGFEEPSPIQAQSIPAILSGKDVIGQAQTGTGKTAAFSIPILETIDPNNRSLQAVVLCP TRELAIQVSTEIRKLAKYSHGIKTLPIYGGQPIDRQIKSLKSGVQVVIGTPGRTIDHINRKTLKMDNVKMIILDEADEML DMGFREDIEMILSKIPEERQTTFFSATMPRGILELTKRYQKDPEHIKVVRKELTVSNTKQYYIETRSSNKLEVLCRLVDV YDPKLSVVFCNTKRKADELVGDLQARGYFADALHGDLKQTQRDIVMDKFRNGTIDILVATDVAARGIDVDDVECVFNYDL PQDEEYYVHRIGRTGRAGREGMSFTFVFGKEMRKMKDIERYTKSKLIKHNIPTITDVEEKKVGTFFAQVKQTIEEGHLTK QLQWLEGFCNDEDYAMVDIAAALVKLSLGEEMKEEIIEEKPRRERGDRKGGTGAKDGMIRLFINIGRNQRVQAKDIVGAI AGEVGIPGKVVGTIDIYDKYTFVEIPKKDAKTVIEKMKDIKIKGNKINIEKANKKKK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=41.7127071823204, Blast_Score=312, Evalue=6e-85, Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=41.5300546448087, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=42.3497267759563, Blast_Score=280, Evalue=3e-75, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=37.6693766937669, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=40.2234636871508, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=37.6288659793814, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=36.7847411444142, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=36.7847411444142, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=37.292817679558, Blast_Score=246, Evalue=3e-65, Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=41.7827298050139, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI148613856, Length=366, Percent_Identity=36.8852459016393, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI38201710, Length=366, Percent_Identity=36.8852459016393, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=37.874659400545, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI224593278, Length=374, Percent_Identity=37.9679144385027, Blast_Score=243, Evalue=5e-64, Organism=Homo sapiens, GI41327771, Length=381, Percent_Identity=36.745406824147, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI13129006, Length=392, Percent_Identity=34.1836734693878, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI301171475, Length=380, Percent_Identity=37.8947368421053, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI87196351, Length=380, Percent_Identity=37.8947368421053, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI301171467, Length=380, Percent_Identity=37.8947368421053, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI169881239, Length=380, Percent_Identity=38.1578947368421, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI13514809, Length=380, Percent_Identity=38.1578947368421, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI21040371, Length=345, Percent_Identity=35.3623188405797, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI31542656, Length=471, Percent_Identity=32.9087048832272, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI4758112, Length=345, Percent_Identity=34.7826086956522, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI18375623, Length=345, Percent_Identity=34.7826086956522, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI55749865, Length=340, Percent_Identity=38.5294117647059, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=33.972602739726, Blast_Score=222, Evalue=6e-58, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=33.0769230769231, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=33.0769230769231, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=34.6368715083799, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=35.4748603351955, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=35.4748603351955, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=33.6111111111111, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=33.6111111111111, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=34.0540540540541, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=33.2439678284182, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=35.0828729281768, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI256223453, Length=359, Percent_Identity=33.4261838440111, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI13514831, Length=396, Percent_Identity=32.5757575757576, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=33.6206896551724, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI38327634, Length=342, Percent_Identity=34.7953216374269, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=31.8681318681319, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38569503, Length=351, Percent_Identity=32.4786324786325, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI38569505, Length=351, Percent_Identity=32.4786324786325, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI17505907, Length=390, Percent_Identity=29.7435897435897, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI9506931, Length=393, Percent_Identity=28.7531806615776, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI256773275, Length=390, Percent_Identity=28.974358974359, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=32.4074074074074, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI154759257, Length=474, Percent_Identity=25.3164556962025, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=28.9156626506024, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI20336298, Length=205, Percent_Identity=35.1219512195122, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI4557365, Length=350, Percent_Identity=25.7142857142857, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI87082221, Length=555, Percent_Identity=37.4774774774775, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI1787605, Length=357, Percent_Identity=42.296918767507, Blast_Score=306, Evalue=3e-84, Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=40.4255319148936, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1790214, Length=377, Percent_Identity=38.4615384615385, Blast_Score=261, Evalue=1e-70, Organism=Escherichia coli, GI1788930, Length=393, Percent_Identity=35.3689567430025, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI48994977, Length=382, Percent_Identity=23.0366492146597, Blast_Score=80, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71987143, Length=365, Percent_Identity=42.1917808219178, Blast_Score=320, Evalue=8e-88, Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=42.7397260273973, Blast_Score=314, Evalue=8e-86, Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=42.4657534246575, Blast_Score=313, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=41.41689373297, Blast_Score=251, Evalue=5e-67, Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=37.5690607734807, Blast_Score=251, Evalue=6e-67, Organism=Caenorhabditis elegans, GI17537549, Length=353, Percent_Identity=39.6600566572238, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=41.9825072886297, Blast_Score=248, Evalue=7e-66, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=33.9779005524862, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI115533224, Length=366, Percent_Identity=37.7049180327869, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=39.1644908616188, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI71982858, Length=345, Percent_Identity=35.3623188405797, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17510309, Length=392, Percent_Identity=38.265306122449, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17510307, Length=392, Percent_Identity=38.265306122449, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995514, Length=392, Percent_Identity=38.265306122449, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=33.3333333333333, Blast_Score=231, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=33.3333333333333, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17510559, Length=483, Percent_Identity=31.8840579710145, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17507945, Length=353, Percent_Identity=37.6770538243626, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.1269841269841, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=34.1107871720117, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=34.1269841269841, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=35.5555555555556, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17509811, Length=388, Percent_Identity=32.7319587628866, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=34.5945945945946, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=34.8648648648649, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=30.3621169916435, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=32.0754716981132, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=31.4356435643564, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=31.4356435643564, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=31.8518518518519, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17556951, Length=368, Percent_Identity=32.0652173913043, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17505370, Length=341, Percent_Identity=33.1378299120235, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=31.3157894736842, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI193208216, Length=390, Percent_Identity=30.2564102564103, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=36.7647058823529, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=32.033426183844, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17507641, Length=382, Percent_Identity=30.1047120418848, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=27.4074074074074, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=29.6, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25148291, Length=385, Percent_Identity=27.012987012987, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71997889, Length=352, Percent_Identity=27.8409090909091, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=46.4646464646465, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=25.7575757575758, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17565430, Length=376, Percent_Identity=26.5957446808511, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17557982, Length=363, Percent_Identity=28.099173553719, Blast_Score=95, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17566630, Length=344, Percent_Identity=27.0348837209302, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI25145561, Length=350, Percent_Identity=26.2857142857143, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=42.2343324250681, Blast_Score=307, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=41.6438356164384, Blast_Score=281, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=41.6438356164384, Blast_Score=281, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=36.9014084507042, Blast_Score=256, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=40, Blast_Score=252, Evalue=9e-68, Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=40.7407407407407, Blast_Score=249, Evalue=9e-67, Organism=Saccharomyces cerevisiae, GI6321856, Length=368, Percent_Identity=38.5869565217391, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=38.0165289256198, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=37.6373626373626, Blast_Score=238, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=34.8773841961853, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=366, Percent_Identity=38.2513661202186, Blast_Score=229, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=34.2696629213483, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=34.7945205479452, Blast_Score=202, Evalue=9e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=35, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6323947, Length=415, Percent_Identity=33.0120481927711, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6320173, Length=419, Percent_Identity=27.6849642004773, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=383, Percent_Identity=32.8981723237598, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=366, Percent_Identity=33.0601092896175, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=29.8429319371728, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6319618, Length=432, Percent_Identity=30.0925925925926, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=34.1597796143251, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=427, Percent_Identity=27.6346604215457, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=414, Percent_Identity=30.9178743961353, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=442, Percent_Identity=28.2805429864253, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=368, Percent_Identity=26.3586956521739, Blast_Score=129, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6321374, Length=472, Percent_Identity=23.3050847457627, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=42.7397260273973, Blast_Score=310, Evalue=2e-84, Organism=Drosophila melanogaster, GI24582080, Length=363, Percent_Identity=42.6997245179063, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI24582078, Length=363, Percent_Identity=42.6997245179063, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI17136248, Length=363, Percent_Identity=42.6997245179063, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI24582075, Length=363, Percent_Identity=42.6997245179063, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI24642151, Length=349, Percent_Identity=39.8280802292264, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=37.9120879120879, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24644483, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI281361218, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24644481, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24644487, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI45551833, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI24644485, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=35.6741573033708, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI24583281, Length=357, Percent_Identity=35.5742296918768, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644479, Length=370, Percent_Identity=37.2972972972973, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI21355075, Length=346, Percent_Identity=38.728323699422, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI24585582, Length=378, Percent_Identity=36.2433862433862, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=38.5269121813031, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI21356161, Length=414, Percent_Identity=36.7149758454106, Blast_Score=238, Evalue=9e-63, Organism=Drosophila melanogaster, GI17985987, Length=383, Percent_Identity=37.0757180156658, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=36.4902506963788, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI18857967, Length=374, Percent_Identity=35.8288770053476, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584994, Length=367, Percent_Identity=38.4196185286104, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.7541899441341, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24581954, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24581952, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24581956, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI17136814, Length=409, Percent_Identity=34.2298288508557, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI28575014, Length=399, Percent_Identity=30.0751879699248, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=36.1022364217252, Blast_Score=201, Evalue=9e-52, Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=35.3760445682451, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=35.3760445682451, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17647335, Length=368, Percent_Identity=29.3478260869565, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24642822, Length=365, Percent_Identity=32.6027397260274, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI21355559, Length=368, Percent_Identity=32.3369565217391, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI20130173, Length=445, Percent_Identity=29.8876404494382, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=30.2777777777778, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=26.3427109974425, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24668515, Length=363, Percent_Identity=27.8236914600551, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17136666, Length=435, Percent_Identity=27.1264367816092, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI19920478, Length=338, Percent_Identity=27.2189349112426, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859659, Length=203, Percent_Identity=31.5270935960591, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571338, Length=203, Percent_Identity=31.5270935960591, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24640164, Length=358, Percent_Identity=23.1843575418994, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646066, Length=338, Percent_Identity=23.9644970414201, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 60579; Mature: 60579
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITKFEDLPISEGIKKAIAEMGFEEPSPIQAQSIPAILSGKDVIGQAQTGTGKTAAFSI CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCHHCCCCHHCCCCCCCCCCEEEEEE PILETIDPNNRSLQAVVLCPTRELAIQVSTEIRKLAKYSHGIKTLPIYGGQPIDRQIKSL CEEEECCCCCCCEEEEEEECCHHHEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH KSGVQVVIGTPGRTIDHINRKTLKMDNVKMIILDEADEMLDMGFREDIEMILSKIPEERQ HCCCEEEEECCCCHHHHCCCCEEEECCEEEEEECCCHHHHHCCCHHHHHHHHHHCCCHHH TTFFSATMPRGILELTKRYQKDPEHIKVVRKELTVSNTKQYYIETRSSNKLEVLCRLVDV HEEEEHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH YDPKLSVVFCNTKRKADELVGDLQARGYFADALHGDLKQTQRDIVMDKFRNGTIDILVAT CCCCEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DVAARGIDVDDVECVFNYDLPQDEEYYVHRIGRTGRAGREGMSFTFVFGKEMRKMKDIER CHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHH YTKSKLIKHNIPTITDVEEKKVGTFFAQVKQTIEEGHLTKQLQWLEGFCNDEDYAMVDIA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AALVKLSLGEEMKEEIIEEKPRRERGDRKGGTGAKDGMIRLFINIGRNQRVQAKDIVGAI HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH AGEVGIPGKVVGTIDIYDKYTFVEIPKKDAKTVIEKMKDIKIKGNKINIEKANKKKK HCCCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHCCEEECCEEEEECCCCCCC >Mature Secondary Structure MNITKFEDLPISEGIKKAIAEMGFEEPSPIQAQSIPAILSGKDVIGQAQTGTGKTAAFSI CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCHHCCCCHHCCCCCCCCCCEEEEEE PILETIDPNNRSLQAVVLCPTRELAIQVSTEIRKLAKYSHGIKTLPIYGGQPIDRQIKSL CEEEECCCCCCCEEEEEEECCHHHEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH KSGVQVVIGTPGRTIDHINRKTLKMDNVKMIILDEADEMLDMGFREDIEMILSKIPEERQ HCCCEEEEECCCCHHHHCCCCEEEECCEEEEEECCCHHHHHCCCHHHHHHHHHHCCCHHH TTFFSATMPRGILELTKRYQKDPEHIKVVRKELTVSNTKQYYIETRSSNKLEVLCRLVDV HEEEEHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH YDPKLSVVFCNTKRKADELVGDLQARGYFADALHGDLKQTQRDIVMDKFRNGTIDILVAT CCCCEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE DVAARGIDVDDVECVFNYDLPQDEEYYVHRIGRTGRAGREGMSFTFVFGKEMRKMKDIER CHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHH YTKSKLIKHNIPTITDVEEKKVGTFFAQVKQTIEEGHLTKQLQWLEGFCNDEDYAMVDIA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AALVKLSLGEEMKEEIIEEKPRRERGDRKGGTGAKDGMIRLFINIGRNQRVQAKDIVGAI HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH AGEVGIPGKVVGTIDIYDKYTFVEIPKKDAKTVIEKMKDIKIKGNKINIEKANKKKK HCCCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHCCEEECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]