The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698327

Identifier: 126698327

GI number: 126698327

Start: 910291

End: 911751

Strand: Direct

Name: 126698327

Synonym: CD0747

Alternate gene names: NA

Gene position: 910291-911751 (Clockwise)

Preceding gene: 126698326

Following gene: 126698328

Centisome position: 21.22

GC content: 28.34

Gene sequence:

>1461_bases
ATGAATAGGTGTAAGTTTGCAAAATTAATTATCACATCAATGATTGTTTTATTACTTACAGGATGTAGTTTAAAGAAGGA
AGATAATTATAAGTTAGACCCAGAAAATCCGACATCAATACAAATTTGGCATTATTATAATGGACAGCAGAAAATGGCTT
TTGATAAGCTTGTTAAGGAATTTAATGACACTGTAGGTGCTGAAAAAGGAATTATTGTTGAAGCATTCAGTCAAGGTAAT
GTAGTTGATTTATCAGAGAAAGTTTTAGATTCTGCAAATAAAAAAGTTGGTTCTGAAGATGTACCAAATATATTTGCAGC
ATACTCAGATACTGCATATGAAATGGATAAATTAGGGTTACTAGTAGATATGGATAAGTACATAAGTAAAGAAGAATTAA
ATGAATACATAGACGAATATGTAGAAGAAGGCAGAATAAATTCTAAGGATGAGTTTAAACTTTTCCCAATTGCAAAATCA
ACTGAAATTTTGATGTTAAATAAAACTGATTGGGATAAATTTGCAAAAGCTACAAATTCAAATATAAATGATATAAAAAC
AATTGAAGGATTAGTAGAGACATCAAAAAAATATTATGAATGGACAGATAGTTTAACGAAAGAGCCTAATGATGGTAAAG
CATTTTTTGGAAGAGATGCTTTAGCAAATTATATTATTATAGGAAGTAAACAACTAGGAGTAGAAATTTTTTCTGTTAAA
GATGGTAAAGTTACACTAAATATTGATGAAAAAGTTATGAAAAAACTATGGGATAATTTCTATGTACCATATATAAATGG
ATATTTTGCTTCTTATGGTAAGTTTCGTTCTGATGATGCAAAAACAGGTGATATATTAGCTCTTGTAGGTTCTAGTTCAG
GAGCAGCATACTTTCCAGATAGAGTAATGCTAAATGATAATGAGAGTTATAATATTGAAACATCTGTTTTTCAAGCACCA
CGTTTTAAAGGAGAAGGAAAATATGCTGTACAACAAGGTGCAGGAATGGCTGTAACAAAATCTACTAAAGAAGAAGAATA
TGCATCAGTAGAATTTTTAAAATGGTTTACAGATAAAGAACCTAATATAAAATTCTCTATTGCTTCTGGATACTTACCAG
TAAAGAAAAAAACGAATGATTTGGATGTTATAAAAGAAGTTATGAAGAAAGATAATTTGAGTTTATCTGATAAAGTTGAA
GGTTCAATAGCCTCATCTATTGAACAGATTAACAGTTGTAATTTATATACTAATAAAGCATTTGATGGTGGAACTAAAGC
TAGACAAATACTTGAATATTCAATGCTTGATAAAGCTAAAGAAGATTCAAATAAAATAAATGAATTAGTAAAAAGTGGAA
CTTCTAAGAAGGATGCAGTAGCACAATTTAATAATGATAAAAATTTTAAAACTTGGTTTGAAATTTTTAAGGCTGAGCTT
GAAAATGCTATAAAAAAATAG

Upstream 100 bases:

>100_bases
CCTGTTTAAATATATCAATAAACGTTCTATAATTAATATAAATAGTGAAGTTACAGTTTTAATGCTATTATAAATTTTAT
AATTTGAAGGAGTAGATTTT

Downstream 100 bases:

>100_bases
ATGAATTGGCAGTTAGTGTGTTGACGAGCACAAAGGTATAGGTGGAATGGGTATGGAAAACAATCTAAGAAAAAACAATT
CAATAATGAAAAAGATGATA

Product: lipoprotein

Products: NA

Alternate protein names: Lipoprotein; ABC Transporter; ABC-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKEFNDTVGAEKGIIVEAFSQGN
VVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGLLVDMDKYISKEELNEYIDEYVEEGRINSKDEFKLFPIAKS
TEILMLNKTDWDKFAKATNSNINDIKTIEGLVETSKKYYEWTDSLTKEPNDGKAFFGRDALANYIIIGSKQLGVEIFSVK
DGKVTLNIDEKVMKKLWDNFYVPYINGYFASYGKFRSDDAKTGDILALVGSSSGAAYFPDRVMLNDNESYNIETSVFQAP
RFKGEGKYAVQQGAGMAVTKSTKEEEYASVEFLKWFTDKEPNIKFSIASGYLPVKKKTNDLDVIKEVMKKDNLSLSDKVE
GSIASSIEQINSCNLYTNKAFDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFKTWFEIFKAEL
ENAIKK

Sequences:

>Translated_486_residues
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKEFNDTVGAEKGIIVEAFSQGN
VVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGLLVDMDKYISKEELNEYIDEYVEEGRINSKDEFKLFPIAKS
TEILMLNKTDWDKFAKATNSNINDIKTIEGLVETSKKYYEWTDSLTKEPNDGKAFFGRDALANYIIIGSKQLGVEIFSVK
DGKVTLNIDEKVMKKLWDNFYVPYINGYFASYGKFRSDDAKTGDILALVGSSSGAAYFPDRVMLNDNESYNIETSVFQAP
RFKGEGKYAVQQGAGMAVTKSTKEEEYASVEFLKWFTDKEPNIKFSIASGYLPVKKKTNDLDVIKEVMKKDNLSLSDKVE
GSIASSIEQINSCNLYTNKAFDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFKTWFEIFKAEL
ENAIKK
>Mature_486_residues
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKEFNDTVGAEKGIIVEAFSQGN
VVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGLLVDMDKYISKEELNEYIDEYVEEGRINSKDEFKLFPIAKS
TEILMLNKTDWDKFAKATNSNINDIKTIEGLVETSKKYYEWTDSLTKEPNDGKAFFGRDALANYIIIGSKQLGVEIFSVK
DGKVTLNIDEKVMKKLWDNFYVPYINGYFASYGKFRSDDAKTGDILALVGSSSGAAYFPDRVMLNDNESYNIETSVFQAP
RFKGEGKYAVQQGAGMAVTKSTKEEEYASVEFLKWFTDKEPNIKFSIASGYLPVKKKTNDLDVIKEVMKKDNLSLSDKVE
GSIASSIEQINSCNLYTNKAFDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFKTWFEIFKAEL
ENAIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54934; Mature: 54934

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEEECCCHHHHHHHHHHH
FNDTVGAEKGIIVEAFSQGNVVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGL
HHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHCCE
LVDMDKYISKEELNEYIDEYVEEGRINSKDEFKLFPIAKSTEILMLNKTDWDKFAKATNS
EEEHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCC
NINDIKTIEGLVETSKKYYEWTDSLTKEPNDGKAFFGRDALANYIIIGSKQLGVEIFSVK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHCCEEEEECHHHCEEEEEEC
DGKVTLNIDEKVMKKLWDNFYVPYINGYFASYGKFRSDDAKTGDILALVGSSSGAAYFPD
CCEEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEECCC
RVMLNDNESYNIETSVFQAPRFKGEGKYAVQQGAGMAVTKSTKEEEYASVEFLKWFTDKE
EEEECCCCCCEEEHHHEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCC
PNIKFSIASGYLPVKKKTNDLDVIKEVMKKDNLSLSDKVEGSIASSIEQINSCNLYTNKA
CCEEEEEECCEEECCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHCCCCEEECCC
FDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFKTWFEIFKAEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
ENAIKK
HHHHCC
>Mature Secondary Structure
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEEEEEEECCCHHHHHHHHHHH
FNDTVGAEKGIIVEAFSQGNVVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGL
HHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHCCE
LVDMDKYISKEELNEYIDEYVEEGRINSKDEFKLFPIAKSTEILMLNKTDWDKFAKATNS
EEEHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCC
NINDIKTIEGLVETSKKYYEWTDSLTKEPNDGKAFFGRDALANYIIIGSKQLGVEIFSVK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHCCEEEEECHHHCEEEEEEC
DGKVTLNIDEKVMKKLWDNFYVPYINGYFASYGKFRSDDAKTGDILALVGSSSGAAYFPD
CCEEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEECCC
RVMLNDNESYNIETSVFQAPRFKGEGKYAVQQGAGMAVTKSTKEEEYASVEFLKWFTDKE
EEEECCCCCCEEEHHHEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCC
PNIKFSIASGYLPVKKKTNDLDVIKEVMKKDNLSLSDKVEGSIASSIEQINSCNLYTNKA
CCEEEEEECCEEECCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHCCCCEEECCC
FDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFKTWFEIFKAEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHH
ENAIKK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA