| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yxeR [H]
Identifier: 126698322
GI number: 126698322
Start: 905503
End: 906618
Strand: Direct
Name: yxeR [H]
Synonym: CD0742
Alternate gene names: 126698322
Gene position: 905503-906618 (Clockwise)
Preceding gene: 126698321
Following gene: 126698324
Centisome position: 21.11
GC content: 34.95
Gene sequence:
>1116_bases ATGCCCTTTGATAAAATTATATTATACATAATGGCTGTGGGAGTGCTTTTAGGAGCGTTAGATAGAATAATTGGAAATAA ATTTGGACTTGGCGAGCAGTTTGAAGAAGGGTTTAATTCAATGGGTCCATTGGCTTTAGGAATGGTTGGTATAGTTTGTT TAGCTCCAGTAATTTCAGATGTACTAGGTCCTATAATAATACCAATCTTCAATCTCTGTGGAGCTGACCCATCTATGTTT GCAACTATTTTAGCGAATGATATGGGAGGGTATCCATTGGCTATGGAACTTGCACACAATAAAGAGGCAGGAATGCTTGC AGGATTGGTTGTGTCATCCATGCTTGGATGTACATTAGTATTTTCAATTCCAGTAGGACTAGGTCTTATAGAATATGAAG ACAGACCATTCTTTGCAAAAGGGTTACTGATAGGCTTGATAACAATACCTTTTGGAGGTATTATAGGAGGATTAATAGCA GGATTTAACTTATCAATGGTAATTATAAATATGATACCAGTGATAATATTGGCAGTAATATTGGCAGTAGGTTTAAAATT TAATTCTACGCTTATGATAAATGGGTCATTAGTTTTTGGAAAATTTATATCTATATTGATAACGATAGGTTTGGGAGCAG CAGCATTTCAAGAAATAACAGGTATAGTACTTATAAAAGGCATGACACCTATAAGAGAAGGTATTCAAGTAATTGGAAGT ATTGCAATCGTGTTATTAGGTACTTTTCCAATATTACATTTATTAGTTAAAGTTCTTAATAAACCACTTACAATAGTGGG TGGAAAATTAGGTATGGATGCCACTAGTGCAGCAGGATTAGTTTTTACTTTAGCCAATAGTATTCCAGTATATAAAATGA TGAAAGATATGAGTCCAAAGGGGAAAGTAGTAAATACTGCTTGGCTGGTTTGTGCTACAGCAGCTTTGGGGGACCATTTA GGATTTACAGCAGGATTAGTTCCAGAGATGATTACACCTGTTGTAATTGGAAAATTGGTTGGAGGAGTATTGGCAATTGC ACTTGCTATACTTATGACAAAAGATTTAACCTTGGAAGAAGAACAAAGTATTAAAATGAAGAAAGATGCAGTGTAG
Upstream 100 bases:
>100_bases CAAGCAGTAAAAAGAGCTATGAATTGGGAAAACGATACCAAAAAGGTGTGTGCTAATTAAGTTACAATAGAGTATTTTAC ATGTATAGGAGGAATTAAAA
Downstream 100 bases:
>100_bases AATAAACAATACTTAAGTCAAATTTAAATTATTTTAAAGTAGGAGTTTAAATAACTAAAAATAAATTAAAAAGACAGACA ATTAAAAAATAATCGAATAA
Product: ethanolamine transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPFDKIILYIMAVGVLLGALDRIIGNKFGLGEQFEEGFNSMGPLALGMVGIVCLAPVISDVLGPIIIPIFNLCGADPSMF ATILANDMGGYPLAMELAHNKEAGMLAGLVVSSMLGCTLVFSIPVGLGLIEYEDRPFFAKGLLIGLITIPFGGIIGGLIA GFNLSMVIINMIPVIILAVILAVGLKFNSTLMINGSLVFGKFISILITIGLGAAAFQEITGIVLIKGMTPIREGIQVIGS IAIVLLGTFPILHLLVKVLNKPLTIVGGKLGMDATSAAGLVFTLANSIPVYKMMKDMSPKGKVVNTAWLVCATAALGDHL GFTAGLVPEMITPVVIGKLVGGVLAIALAILMTKDLTLEEEQSIKMKKDAV
Sequences:
>Translated_371_residues MPFDKIILYIMAVGVLLGALDRIIGNKFGLGEQFEEGFNSMGPLALGMVGIVCLAPVISDVLGPIIIPIFNLCGADPSMF ATILANDMGGYPLAMELAHNKEAGMLAGLVVSSMLGCTLVFSIPVGLGLIEYEDRPFFAKGLLIGLITIPFGGIIGGLIA GFNLSMVIINMIPVIILAVILAVGLKFNSTLMINGSLVFGKFISILITIGLGAAAFQEITGIVLIKGMTPIREGIQVIGS IAIVLLGTFPILHLLVKVLNKPLTIVGGKLGMDATSAAGLVFTLANSIPVYKMMKDMSPKGKVVNTAWLVCATAALGDHL GFTAGLVPEMITPVVIGKLVGGVLAIALAILMTKDLTLEEEQSIKMKKDAV >Mature_370_residues PFDKIILYIMAVGVLLGALDRIIGNKFGLGEQFEEGFNSMGPLALGMVGIVCLAPVISDVLGPIIIPIFNLCGADPSMFA TILANDMGGYPLAMELAHNKEAGMLAGLVVSSMLGCTLVFSIPVGLGLIEYEDRPFFAKGLLIGLITIPFGGIIGGLIAG FNLSMVIINMIPVIILAVILAVGLKFNSTLMINGSLVFGKFISILITIGLGAAAFQEITGIVLIKGMTPIREGIQVIGSI AIVLLGTFPILHLLVKVLNKPLTIVGGKLGMDATSAAGLVFTLANSIPVYKMMKDMSPKGKVVNTAWLVCATAALGDHLG FTAGLVPEMITPVVIGKLVGGVLAIALAILMTKDLTLEEEQSIKMKKDAV
Specific function: Possibly Involved In The Transport Of Ethanolamine From The Periplasm To The Cytoplasm. [C]
COG id: COG3192
COG function: function code E; Ethanolamine utilization protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutH family [H]
Homologues:
Organism=Escherichia coli, GI1788794, Length=409, Percent_Identity=46.4547677261614, Blast_Score=310, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007441 [H]
Pfam domain/function: PF04346 EutH [H]
EC number: NA
Molecular weight: Translated: 38732; Mature: 38601
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDKIILYIMAVGVLLGALDRIIGNKFGLGEQFEEGFNSMGPLALGMVGIVCLAPVISD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLGPIIIPIFNLCGADPSMFATILANDMGGYPLAMELAHNKEAGMLAGLVVSSMLGCTLV HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH FSIPVGLGLIEYEDRPFFAKGLLIGLITIPFGGIIGGLIAGFNLSMVIINMIPVIILAVI HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVGLKFNSTLMINGSLVFGKFISILITIGLGAAAFQEITGIVLIKGMTPIREGIQVIGS HHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCHHHHHHHHHHH IAIVLLGTFPILHLLVKVLNKPLTIVGGKLGMDATSAAGLVFTLANSIPVYKMMKDMSPK HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC GKVVNTAWLVCATAALGDHLGFTAGLVPEMITPVVIGKLVGGVLAIALAILMTKDLTLEE CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EQSIKMKKDAV HHHCCHHHCCC >Mature Secondary Structure PFDKIILYIMAVGVLLGALDRIIGNKFGLGEQFEEGFNSMGPLALGMVGIVCLAPVISD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLGPIIIPIFNLCGADPSMFATILANDMGGYPLAMELAHNKEAGMLAGLVVSSMLGCTLV HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH FSIPVGLGLIEYEDRPFFAKGLLIGLITIPFGGIIGGLIAGFNLSMVIINMIPVIILAVI HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVGLKFNSTLMINGSLVFGKFISILITIGLGAAAFQEITGIVLIKGMTPIREGIQVIGS HHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCHHHHHHHHHHH IAIVLLGTFPILHLLVKVLNKPLTIVGGKLGMDATSAAGLVFTLANSIPVYKMMKDMSPK HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCC GKVVNTAWLVCATAALGDHLGFTAGLVPEMITPVVIGKLVGGVLAIALAILMTKDLTLEE CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EQSIKMKKDAV HHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]