| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698283
Identifier: 126698283
GI number: 126698283
Start: 858043
End: 858621
Strand: Direct
Name: 126698283
Synonym: CD0704
Alternate gene names: NA
Gene position: 858043-858621 (Clockwise)
Preceding gene: 126698282
Following gene: 126698284
Centisome position: 20.0
GC content: 33.68
Gene sequence:
>579_bases ATGAGAGAAGAAGCTTTAGAAATTTTATTTAAGTATTTAGAAACTGATAGAATGAGAAAACATTGTTATGCTGTTGAAGC TGTTATGAGAGAATTAGCCAAAAGACTAGAGCCAGAAAAAGAAGAAGAGTGGGCAGTGGCAGGTCTTTTACATGATTTGG ATTCAGATATAGTTGGAAGAAAGCCAGGAGAAATATGTGAAGGACATGCTACAACAACAGTAGAACTGCTTAAAAAAGAA AACTTCGGTGACGAAGAAATGTATAGAGCAATACTTGGTCATCATGATGGAATGGGAGTTACAAGAACTAGCCTAATGGA AAAAGCAATATATGCAGCAGACCCTATAACTGGGTTTATAACTGCTATAGCTTTAGTTTATCCAGATAAAAAACTTACCA GTGTAAAGACTAAGTCTGTTATTAAAAGAATGAAAGAAACGAGATTTGCTTCAAATGTAAATAGAGATGCAATGAGAAGT ATAGAAGATATAGGGATTCCATTTGATGAATTTGCAGAGCTTTCTCTTAATGCAATGAAGAATATAAGTGATATGCTTGA AAGTGCTGAAAATAATTAG
Upstream 100 bases:
>100_bases TAACATGAAAAATATACATGAATATATATAAAAACTTGAATTTATGTGTATTAATATATAAAAATATCATATATGTGAAA AAACAGGGGGATTGGTGAAA
Downstream 100 bases:
>100_bases TTGAGAATATAAAAGAGAAAGCAAGGCGAGATACATGAAACTTACAACTATTTGTTATATAGAAAAAGATGACAAGACTT TGATGTTGTACAGAAATAAA
Product: phosphohydrolase
Products: NA
Alternate protein names: Metal Dependent Phophohydrolase; HDIG Domain-Containing Protein; Hydrolase; HDIG Domain Protein; Hdig Domain Protein; HD Superfamily Hydrolase; HDIG-Domain-Containing Protein; Hydrolase Family Protein; Domain HDIG Protein; Phosphohydrolase; HD Domain Protein; HAD-Superfamily Hydrolase; Metal-Dependent Phosphoesterase
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGRKPGEICEGHATTTVELLKKE NFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFITAIALVYPDKKLTSVKTKSVIKRMKETRFASNVNRDAMRS IEDIGIPFDEFAELSLNAMKNISDMLESAENN
Sequences:
>Translated_192_residues MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGRKPGEICEGHATTTVELLKKE NFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFITAIALVYPDKKLTSVKTKSVIKRMKETRFASNVNRDAMRS IEDIGIPFDEFAELSLNAMKNISDMLESAENN >Mature_192_residues MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGRKPGEICEGHATTTVELLKKE NFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFITAIALVYPDKKLTSVKTKSVIKRMKETRFASNVNRDAMRS IEDIGIPFDEFAELSLNAMKNISDMLESAENN
Specific function: Unknown
COG id: COG2316
COG function: function code R; Predicted hydrolase (HD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21800; Mature: 21800
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC KPGEICEGHATTTVELLKKENFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFI CCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH TAIALVYPDKKLTSVKTKSVIKRMKETRFASNVNRDAMRSIEDIGIPFDEFAELSLNAMK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH NISDMLESAENN HHHHHHHHHCCC >Mature Secondary Structure MREEALEILFKYLETDRMRKHCYAVEAVMRELAKRLEPEKEEEWAVAGLLHDLDSDIVGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC KPGEICEGHATTTVELLKKENFGDEEMYRAILGHHDGMGVTRTSLMEKAIYAADPITGFI CCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHH TAIALVYPDKKLTSVKTKSVIKRMKETRFASNVNRDAMRSIEDIGIPFDEFAELSLNAMK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHH NISDMLESAENN HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA