Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698281

Identifier: 126698281

GI number: 126698281

Start: 854087

End: 854770

Strand: Direct

Name: 126698281

Synonym: CD0702

Alternate gene names: NA

Gene position: 854087-854770 (Clockwise)

Preceding gene: 126698280

Following gene: 126698282

Centisome position: 19.91

GC content: 26.32

Gene sequence:

>684_bases
ATGACAAGCAAGAGTCAGATGTCTGAATCATTCTTTTTATGTTCTTTGTTGGCAATAACAGGAGGATTTTTGGATATTTA
TACTTATGTGGTAAGAGGTAAAGTCTTTGCTAATGCACAAACTGGAAATATAGTTTTATTTGGGCTTAATATAGCAGAAG
GTAATGTAAAGGAATCATTTTATTATTTGATTCCTATTTTGGCATTTATGTTAGGTGTATTTATAGCCGAGAAGATAAGA
AAGTATTTTACAAATAATAAGACAAAGATTCATTGGCGTCAGGTTATCATTATAATTGAAATGATTACAATACTTATTGT
TTCATTTATTCCTAGAGGAAGATTTAATATGTTTGTAAATGTTGCTATTTCTTTTATTTGTTCAATGCAAGTAGAGAGTT
TTAGAAAAGTAAATGGGAATAGTTTTGCAACGACAATGTGTACTGGAAATTTAAGAAGTGCTACAGAAACTTTATTTCAT
TATATACATACTAAGAATATTTTTATGATAAAAAAGAGTTTACAGTATTATGCTATTATTATATTCTTTATATCTGGAGC
TATTTTAGGAACTTTTTTTACAAAAATTTTCGTGGAAAAATCAATACTAATATGTTTTTTTATTTTGGCAGTGGTCTTTG
GAATTATGTTTATCAATAAAGATGATTCATTTAATGAAAATTAA

Upstream 100 bases:

>100_bases
GACAATATTTAAATATAAATAATTTTTTTATATCAATGAAAAATAGAATCTAAAATGATTTTGATTTTGTATCTATCATT
AGAAAGCGAGAGGTTTATAT

Downstream 100 bases:

>100_bases
CTTTCTGTAAATTTACAAAAAAATGAAGCTGTTATTTGATATACTTTATATATAGCAAATATTGTATAGATTAATTAAAG
AATTTAAAATATAGTAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESFYYLIPILAFMLGVFIAEKIR
KYFTNNKTKIHWRQVIIIIEMITILIVSFIPRGRFNMFVNVAISFICSMQVESFRKVNGNSFATTMCTGNLRSATETLFH
YIHTKNIFMIKKSLQYYAIIIFFISGAILGTFFTKIFVEKSILICFFILAVVFGIMFINKDDSFNEN

Sequences:

>Translated_227_residues
MTSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESFYYLIPILAFMLGVFIAEKIR
KYFTNNKTKIHWRQVIIIIEMITILIVSFIPRGRFNMFVNVAISFICSMQVESFRKVNGNSFATTMCTGNLRSATETLFH
YIHTKNIFMIKKSLQYYAIIIFFISGAILGTFFTKIFVEKSILICFFILAVVFGIMFINKDDSFNEN
>Mature_226_residues
TSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESFYYLIPILAFMLGVFIAEKIRK
YFTNNKTKIHWRQVIIIIEMITILIVSFIPRGRFNMFVNVAISFICSMQVESFRKVNGNSFATTMCTGNLRSATETLFHY
IHTKNIFMIKKSLQYYAIIIFFISGAILGTFFTKIFVEKSILICFFILAVVFGIMFINKDDSFNEN

Specific function: Unknown

COG id: COG3619

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25966; Mature: 25835

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESF
CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCHHHHH
YYLIPILAFMLGVFIAEKIRKYFTNNKTKIHWRQVIIIIEMITILIVSFIPRGRFNMFVN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VAISFICSMQVESFRKVNGNSFATTMCTGNLRSATETLFHYIHTKNIFMIKKSLQYYAII
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
IFFISGAILGTFFTKIFVEKSILICFFILAVVFGIMFINKDDSFNEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure 
TSKSQMSESFFLCSLLAITGGFLDIYTYVVRGKVFANAQTGNIVLFGLNIAEGNVKESF
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCHHHHH
YYLIPILAFMLGVFIAEKIRKYFTNNKTKIHWRQVIIIIEMITILIVSFIPRGRFNMFVN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VAISFICSMQVESFRKVNGNSFATTMCTGNLRSATETLFHYIHTKNIFMIKKSLQYYAII
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
IFFISGAILGTFFTKIFVEKSILICFFILAVVFGIMFINKDDSFNEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA