Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is pheT [H]

Identifier: 126698279

GI number: 126698279

Start: 850747

End: 853140

Strand: Direct

Name: pheT [H]

Synonym: CD0700

Alternate gene names: 126698279

Gene position: 850747-853140 (Clockwise)

Preceding gene: 126698278

Following gene: 126698280

Centisome position: 19.83

GC content: 30.95

Gene sequence:

>2394_bases
ATGTTAGTATCTTTAAAATGGCTTAGAGACTATGTTGATATAGACATAGATGTAAAAGAGTTCGCTGATAAAATGACAAT
GACAGGAACTAAAGTTGAAACAATAGATTATTATGGTGAAGAAATAGAAAATATATTGGTTGGAAAGATTTTAGAAATAA
AACAACATCCAAATGCTGATAAGTTGGTTGTAACCAAAGTAGATATTGGAGATAAAGTTGTTCAAATAGTTACAGGAGCT
ACAAATATATCAGAAGGAGATTATATTCCAGTAGCTGTAAATGGTTCTAAGTTACCTGGAGGAGTTGAAATCAAACAGAC
TGATTTCAGAGGTGAATTATCAGATGGTATGATGTGTTCAGCAGCTGAACTAGGTATAGATGAACATTACATTGAGGAGT
ATAAAAGAGGTGGTATATATATTTTAGACCACGAAGATTCTTATGAATTAGGAAAAGATATAAAAGATGTTTTAGGATTA
AAAGATGCTTTAATAGATTTTGAATTAACTTCAAACAGACCTGATTGTAAATGCATGATGGGTATAGCTAGAGAAGCAGC
TGCAACTATAGGAACAAAAGTAAAATATCCTGAAATCGAAGTAAAAGAAAGTGATGAAGAGATAGATTTCAAAGTTGAGA
TAGATAATCCAGATTTATGTAGAAGATATGTTGCTAGAATGGTTACAGATGTAAAAATAGAACCTTCTCCATATTGGATG
CAAAGAAGACTTACAGAAGCAGGAGTAAGACCTATAAGTAACATAGTCGATATAACAAACTTCGTAATGTTAGAGCTTGG
TCAACCACTTCATGCTTTTGATATAAATCAAGTAGAGACTGGAAGAATAGTAGTAAGAAATGCTAAAGATGGAGAGAAAC
TTGTAACATTAGATGATGTTGAGAGAACATTAGACAAAGATATGCTAGTTATAACAAATGGAGAAAAATCACTTGGTTTA
GCTGGTGTAATGGGTGGTGCTAACTCAGAAATAACTTCTAATACGAAGACTGTACTTTTTGAAAGTGCCAATTTCAAACC
AGAAAACATAAGAATGACAGCTAAAAAAGTTGGTATTAGGTCAGAAGCATCTTCAAGAAATGAAAAAGACTTAGACCCTA
ATCTTGCAGAGATAGCAGCAAATAGAGCTGCACAACTTGTTGAAATGTTAGGAGCAGGAAAAGTTTTAAAAGGTGTTGTA
GATGTATATCCAAATAAACCAGAACCTAAAAAATTGGTAGTAAATCCTCAAAGAATTAACCACCTATTAGGTGTAGATGT
ACCAATGGAGCAGTTTGTAGGAATTTTAGAATCATTAGAGTTTAAATGTAATTTGGTAGCTAATGATAAATTAGAAATAG
ATGTACCAAGCTTTAGAACAGATATGGAACAAGAAGCTGATGTATGGGAAGAAATAGCTAGAATTTATGGATTTGAGAAT
ATACCTTCTGTACAATTAGAAGGAAATACGACAGCAGGAATTAAAACTTCAAAACAAAAATTCATGGATGCTTTAAAAGA
TAATTCAACTGCTGTAGGATTAAATGAAATATTAACATATTCATTTGTAAGCCCTAAGGGAGTAGATAAGATAAGAGTAC
CAGAAGGTAATGCAAAGAGAAATTTTGTTAAATTACTTAACCCATTAGGAGAAGAAACTTCTGTAATGAGAACTACTTTA
ATACCAAATATGTTAGATGTTTTATCAACTAATGTATCTCATAAAATAGAAGAAGTATCTGCATTTGAGTGTGGACATAT
ATTCATCCCACAAGATTCAGAATTACCTAAGGAAGAAAATAGAATGTGTGTAGGTATGTATGGTAAAGATGTTGACTTCT
TTACACTAAAAGGAACTATAGAAACTATACTTGTAAATGTCGGATTTAAATGTTATGAAATTGAACCTCAAGATAATAAT
ACTACCTTCCACCCTGGTAGATGTGCTAAAATAGTGTATAATAATAAATATGTAGGTACATTAGGTGAATTGCATCCAGA
TGTTATAGAAAACTACAATCTAGGTCAAAGAGTTTATGTCGCTGAAATAGATATTGACTTTGTATTTGATAATTCTGATA
GAACAAAGAATTATGTTCCATTACCAAAATATCCATCTACATCAAGAGATATAGCTCTTATTGTTAAAGATGATGTATTT
GTAAAACAAATAGAAGATATAATAAAGGAAAATGGTCAAGGATTAGTAGAAAGCTACAAGTTATTTGATGTTTACAAAGG
TTCTCAAATAGAAGCTGGATACAAGTCAATTGCATATTCAATAACTTATAGAAGTAAAGATAAAACTCTAACAGATGAAG
ATGTAGCTAAGGTGCATGATAAGATATTAAGTGAATTAAGCGAAAAATTAAATGCTAACTTAAGATCAAATTAA

Upstream 100 bases:

>100_bases
GAAAGACTTGCAATGCTTAAATACGAAATAGATGATATTAGATTATTATTCGAAAATGATATGAGATTCTTAAATCAATT
TTAATTAGGAGGGTATGTAG

Downstream 100 bases:

>100_bases
CAACTAATGTCGGGGGAGGTTAGGATGAACAAAGTAATGGTTAAAATCCATGGCGCTGAATATCCAATGGTTGGAGACAA
ATCAGAGAAGTTTATGATTA

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 797; Mature: 797

Protein sequence:

>797_residues
MLVSLKWLRDYVDIDIDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNADKLVVTKVDIGDKVVQIVTGA
TNISEGDYIPVAVNGSKLPGGVEIKQTDFRGELSDGMMCSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGL
KDALIDFELTSNRPDCKCMMGIAREAAATIGTKVKYPEIEVKESDEEIDFKVEIDNPDLCRRYVARMVTDVKIEPSPYWM
QRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVTLDDVERTLDKDMLVITNGEKSLGL
AGVMGGANSEITSNTKTVLFESANFKPENIRMTAKKVGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVV
DVYPNKPEPKKLVVNPQRINHLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIYGFEN
IPSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKRNFVKLLNPLGEETSVMRTTL
IPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEENRMCVGMYGKDVDFFTLKGTIETILVNVGFKCYEIEPQDNN
TTFHPGRCAKIVYNNKYVGTLGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVPLPKYPSTSRDIALIVKDDVF
VKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHDKILSELSEKLNANLRSN

Sequences:

>Translated_797_residues
MLVSLKWLRDYVDIDIDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNADKLVVTKVDIGDKVVQIVTGA
TNISEGDYIPVAVNGSKLPGGVEIKQTDFRGELSDGMMCSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGL
KDALIDFELTSNRPDCKCMMGIAREAAATIGTKVKYPEIEVKESDEEIDFKVEIDNPDLCRRYVARMVTDVKIEPSPYWM
QRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVTLDDVERTLDKDMLVITNGEKSLGL
AGVMGGANSEITSNTKTVLFESANFKPENIRMTAKKVGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVV
DVYPNKPEPKKLVVNPQRINHLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIYGFEN
IPSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKRNFVKLLNPLGEETSVMRTTL
IPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEENRMCVGMYGKDVDFFTLKGTIETILVNVGFKCYEIEPQDNN
TTFHPGRCAKIVYNNKYVGTLGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVPLPKYPSTSRDIALIVKDDVF
VKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHDKILSELSEKLNANLRSN
>Mature_797_residues
MLVSLKWLRDYVDIDIDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNADKLVVTKVDIGDKVVQIVTGA
TNISEGDYIPVAVNGSKLPGGVEIKQTDFRGELSDGMMCSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGL
KDALIDFELTSNRPDCKCMMGIAREAAATIGTKVKYPEIEVKESDEEIDFKVEIDNPDLCRRYVARMVTDVKIEPSPYWM
QRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVTLDDVERTLDKDMLVITNGEKSLGL
AGVMGGANSEITSNTKTVLFESANFKPENIRMTAKKVGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVV
DVYPNKPEPKKLVVNPQRINHLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIYGFEN
IPSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKRNFVKLLNPLGEETSVMRTTL
IPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEENRMCVGMYGKDVDFFTLKGTIETILVNVGFKCYEIEPQDNN
TTFHPGRCAKIVYNNKYVGTLGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVPLPKYPSTSRDIALIVKDDVF
VKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHDKILSELSEKLNANLRSN

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=291, Percent_Identity=27.4914089347079, Blast_Score=99, Evalue=2e-20,
Organism=Escherichia coli, GI1788006, Length=816, Percent_Identity=34.1911764705882, Blast_Score=427, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI17533403, Length=300, Percent_Identity=29.3333333333333, Blast_Score=108, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6323089, Length=294, Percent_Identity=27.2108843537415, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI21355211, Length=303, Percent_Identity=25.7425742574257, Blast_Score=97, Evalue=5e-20,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 89235; Mature: 89235

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSLKWLRDYVDIDIDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNAD
CEEEHHHHHHHHCCCEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC
KLVVTKVDIGDKVVQIVTGATNISEGDYIPVAVNGSKLPGGVEIKQTDFRGELSDGMMCS
EEEEEEECCCCCEEHEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEE
AAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGLKDALIDFELTSNRPDCKCMM
HHHCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHH
GIAREAAATIGTKVKYPEIEVKESDEEIDFKVEIDNPDLCRRYVARMVTDVKIEPSPYWM
HHHHHHHHHHCCEEECCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCEECCCHHHH
QRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVTLDDV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCEEEEEECCCCCEEEEHHHH
ERTLDKDMLVITNGEKSLGLAGVMGGANSEITSNTKTVLFESANFKPENIRMTAKKVGIR
HHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHCCCC
SEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNPQRIN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECHHHHH
HLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIYGFEN
HHHCCCCCHHHHHHHHHCCCEEEEEEECCEEEEECCHHHCCCHHHHHHHHHHHHHHCCCC
IPSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKR
CCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHEEEECCCCCCCEEECCCCCCHH
NFVKLLNPLGEETSVMRTTLIPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEEN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCHHHC
RMCVGMYGKDVDFFTLKGTIETILVNVGFKCYEIEPQDNNTTFHPGRCAKIVYNNKYVGT
CEEEEEECCCCEEEEECCHHEEHHEECCEEEEEECCCCCCCEECCCCEEEEEECCCEEEC
LGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVPLPKYPSTSRDIALIVKDDVF
HHHCCHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
VKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHD
HHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHH
KILSELSEKLNANLRSN
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLVSLKWLRDYVDIDIDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNAD
CEEEHHHHHHHHCCCEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC
KLVVTKVDIGDKVVQIVTGATNISEGDYIPVAVNGSKLPGGVEIKQTDFRGELSDGMMCS
EEEEEEECCCCCEEHEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEE
AAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGLKDALIDFELTSNRPDCKCMM
HHHCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHH
GIAREAAATIGTKVKYPEIEVKESDEEIDFKVEIDNPDLCRRYVARMVTDVKIEPSPYWM
HHHHHHHHHHCCEEECCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCEECCCHHHH
QRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVTLDDV
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCEEEEEECCCCCEEEEHHHH
ERTLDKDMLVITNGEKSLGLAGVMGGANSEITSNTKTVLFESANFKPENIRMTAKKVGIR
HHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHCCCC
SEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNPQRIN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECHHHHH
HLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIYGFEN
HHHCCCCCHHHHHHHHHCCCEEEEEEECCEEEEECCHHHCCCHHHHHHHHHHHHHHCCCC
IPSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKIRVPEGNAKR
CCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHEEEECCCCCCCEEECCCCCCHH
NFVKLLNPLGEETSVMRTTLIPNMLDVLSTNVSHKIEEVSAFECGHIFIPQDSELPKEEN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCHHHC
RMCVGMYGKDVDFFTLKGTIETILVNVGFKCYEIEPQDNNTTFHPGRCAKIVYNNKYVGT
CEEEEEECCCCEEEEECCHHEEHHEECCEEEEEECCCCCCCEECCCCEEEEEECCCEEEC
LGELHPDVIENYNLGQRVYVAEIDIDFVFDNSDRTKNYVPLPKYPSTSRDIALIVKDDVF
HHHCCHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
VKQIEDIIKENGQGLVESYKLFDVYKGSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHD
HHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHH
KILSELSEKLNANLRSN
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]