| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698251
Identifier: 126698251
GI number: 126698251
Start: 815706
End: 816491
Strand: Direct
Name: 126698251
Synonym: CD0672
Alternate gene names: NA
Gene position: 815706-816491 (Clockwise)
Preceding gene: 126698250
Following gene: 126698252
Centisome position: 19.01
GC content: 28.37
Gene sequence:
>786_bases ATGAATTTTGAAAATGATTTTATTACTCCAGAATTTAGAAAAAAATACATAGGATTAGTATTAGATAATGCTCAAAATAT TAATAAAGTATACACAACTACTTTTCCTGATAAAGAAATAATTAAGCAAGTTATAGATAAAGATGAAAAAGATATTTTAA TTTTTTCACATCATGCAATGGGATACATAGCATCAGATGAAGGTTTTCCATTTCACGACATACCACTATCTTATATGGAA GAGATGAAAAATCGTAGAATTTCTTTTTATGTATTACATTCTCCACTAGACAACTATAGTGACTATTCAACTTCTGTTAG TTTTGCAAAAGCTCTGGGTTTAGAAATAGTCAAACCATTTTGTAAATATGACGATAAAATTGAGGTAGGAGTTATATGTA AAACATCACTAAAATCAATAGAAGAGATTAAGGAATTAATTAAAAAATCTGTTGGTCATGATGTGAAATTGTATGATTAT GGAGATTCTGTATTAAAAGATGGTTTAGTTGCTATTGCAGCAGGGGGAGGAAGTTATCCATTTGTAGCAAGAGAAGTTGC TGAACTTGGTATAAATCTATATATTACTGGGTTTACTAAGCCTTTAAAACATTTTGAACCAGTATTAGAGTTCCATCAAA TAGCAAAAGATAATTTAATTAATGTTATAGGTGCTACTCATTATTCTACAGAAAAATTTGCGTGTATGGGCATGGTCGAT TATTTTAAAAATCTAGGTTTAGAATCAGAATTTTTGCAAGGAAAATATTACTTAGAGGATTTATAG
Upstream 100 bases:
>100_bases ATATTATTATAAAGGAGTGGTTATTATTAAGGCAATTGAACTTTATAAAAAATTAGATTTAGAATTTAATATTAAAAATA TTAATGATGATTGGAGTTTT
Downstream 100 bases:
>100_bases GACATATTAAACAATAAAAATAAACAGTTAGTAAAAATTTATTTTACTAACTGTTTATTTTTTTACCTATTTATCCAGTG TTTTGAAAAAATCTATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNFENDFITPEFRKKYIGLVLDNAQNINKVYTTTFPDKEIIKQVIDKDEKDILIFSHHAMGYIASDEGFPFHDIPLSYME EMKNRRISFYVLHSPLDNYSDYSTSVSFAKALGLEIVKPFCKYDDKIEVGVICKTSLKSIEEIKELIKKSVGHDVKLYDY GDSVLKDGLVAIAAGGGSYPFVAREVAELGINLYITGFTKPLKHFEPVLEFHQIAKDNLINVIGATHYSTEKFACMGMVD YFKNLGLESEFLQGKYYLEDL
Sequences:
>Translated_261_residues MNFENDFITPEFRKKYIGLVLDNAQNINKVYTTTFPDKEIIKQVIDKDEKDILIFSHHAMGYIASDEGFPFHDIPLSYME EMKNRRISFYVLHSPLDNYSDYSTSVSFAKALGLEIVKPFCKYDDKIEVGVICKTSLKSIEEIKELIKKSVGHDVKLYDY GDSVLKDGLVAIAAGGGSYPFVAREVAELGINLYITGFTKPLKHFEPVLEFHQIAKDNLINVIGATHYSTEKFACMGMVD YFKNLGLESEFLQGKYYLEDL >Mature_261_residues MNFENDFITPEFRKKYIGLVLDNAQNINKVYTTTFPDKEIIKQVIDKDEKDILIFSHHAMGYIASDEGFPFHDIPLSYME EMKNRRISFYVLHSPLDNYSDYSTSVSFAKALGLEIVKPFCKYDDKIEVGVICKTSLKSIEEIKELIKKSVGHDVKLYDY GDSVLKDGLVAIAAGGGSYPFVAREVAELGINLYITGFTKPLKHFEPVLEFHQIAKDNLINVIGATHYSTEKFACMGMVD YFKNLGLESEFLQGKYYLEDL
Specific function: Unknown
COG id: COG0327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29753; Mature: 29753
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFENDFITPEFRKKYIGLVLDNAQNINKVYTTTFPDKEIIKQVIDKDEKDILIFSHHAM CCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCCC GYIASDEGFPFHDIPLSYMEEMKNRRISFYVLHSPLDNYSDYSTSVSFAKALGLEIVKPF EEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH CKYDDKIEVGVICKTSLKSIEEIKELIKKSVGHDVKLYDYGDSVLKDGLVAIAAGGGSYP HCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCEEEEEECCCCCC FVAREVAELGINLYITGFTKPLKHFEPVLEFHQIAKDNLINVIGATHYSTEKFACMGMVD HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YFKNLGLESEFLQGKYYLEDL HHHHCCCCHHHHCCCEEECCC >Mature Secondary Structure MNFENDFITPEFRKKYIGLVLDNAQNINKVYTTTFPDKEIIKQVIDKDEKDILIFSHHAM CCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCCC GYIASDEGFPFHDIPLSYMEEMKNRRISFYVLHSPLDNYSDYSTSVSFAKALGLEIVKPF EEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH CKYDDKIEVGVICKTSLKSIEEIKELIKKSVGHDVKLYDYGDSVLKDGLVAIAAGGGSYP HCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCEEEEEECCCCCC FVAREVAELGINLYITGFTKPLKHFEPVLEFHQIAKDNLINVIGATHYSTEKFACMGMVD HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YFKNLGLESEFLQGKYYLEDL HHHHCCCCHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA