| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698229
Identifier: 126698229
GI number: 126698229
Start: 775587
End: 776777
Strand: Direct
Name: 126698229
Synonym: CD0651
Alternate gene names: NA
Gene position: 775587-776777 (Clockwise)
Preceding gene: 126698228
Following gene: 126698230
Centisome position: 18.08
GC content: 33.84
Gene sequence:
>1191_bases ATGAGTGATATGTTATTATGGTTTAGTGTCGTATTAGTTTTATTTGCTATTGGGGATTTAATTGCAAGCAAAACAAAAGC AAAAGTATCAGCTGTATTTGTTACACTACTTTTATTTTTGATTCTATTTGTCACAAAAGCAATACCAGCTGATATTATTG AAAAAGCAGGTATGACCGCAGCAGCTAGTTGGAGTGTTCCAATGATTATGTTTAGTATGGGAACAATGTTGAATGTTAAA CAATTTATAGACGAATGGAGAACAGTATTGACAGCATGGCTTGGAATTGTAGCAGTTATAGTCTGTGTCTCATTATGTAT TCCTTTGTTTGGAAAATCAACAGTATTGACAAGCATACCAGTTATAAATGGAGCTTTACCTGCTACTACTATTATGACAC AAGCAGCACTAGAAAAAGGACTGACACTTGCAGCAGCTACAGCAACAGTTGTATTTGCAATTCAGAAGTTTATTGGTACA CCAATAGCTTCAAGAGCAGCGTTACAAGAGGCAAACCGTCTTTTAGTAGAATATCATGAAGCAAAATCAAAAGGCATTGA TTTAGCAAATGTTGATACTGATAAGAAAGAAGCAGAGAATACAGGCACAAAAGTAAAACAAGCTTTCTGTGAAAAATACG ATAAATATTATTCTACAAATGTTTGTATATTTTTTATAGCATTATTCTCTTATCTAGGGTATGAACTTTCAGAGATTATT CATGTAAATTATTCTATTGTATGTCTTGTTGTTGGTGTTATTGTAACACGTATTGGTATTGTGCCAAAAGACATTTTGGA AAAAGGAAAAATCAAGGGATTTATCAACATGGTTGTGTTTGCAGCTGTTATTCCTTCTTTAGCAAAAGTTTCTTTGACAG ATTTAATTAGTCTTTTTGTACCAATTGTGGGTATGTTTGCAGCTTCTATCATTGGTATATTCTTTATGATGAAGGTGTTA CCAGGTTGGAAAATTATCGGTTCTAAACCTCTTGCTTTTGGAGTAGGGTTTTGTCAGATGTTGGGATTCCCAACTACATA TTTAATTTCAAATGAAGTGTGTAATGCTGTTGGAGAAACGGAAGAAGAAAGAGCATATTTGATGTCTAAGATTATGCCTA AGCTGGTAGTTGGTGGTATGGCTTGTATGATTTCTATTGTGGTAGCTGGTCTTATGGTACCAATGTTATAG
Upstream 100 bases:
>100_bases ACATGGATTGTCTAGAAATGGAAGACCATCTAATAGAATTGCACGAGCAAATGCTATTGTAGATTGGTTTGAAAGATATT TATAATAAGGGGGTTATTCT
Downstream 100 bases:
>100_bases ATAGGTTTCATAGTTAAAAAAGTGGTGTTAATTTATAGGAGAAGCTAAAAAGTAGTATTAATTTATAAATAAAGCTAGAA AGTCAGTATTAATTTATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTAAASWSVPMIMFSMGTMLNVK QFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIPVINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGT PIASRAALQEANRLLVEYHEAKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEII HVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFVPIVGMFAASIIGIFFMMKVL PGWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGETEEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML
Sequences:
>Translated_396_residues MSDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTAAASWSVPMIMFSMGTMLNVK QFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIPVINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGT PIASRAALQEANRLLVEYHEAKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEII HVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFVPIVGMFAASIIGIFFMMKVL PGWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGETEEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML >Mature_395_residues SDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTAAASWSVPMIMFSMGTMLNVKQ FIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIPVINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGTP IASRAALQEANRLLVEYHEAKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEIIH VNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFVPIVGMFAASIIGIFFMMKVLP GWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGETEEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42837; Mature: 42706
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC AASWSVPMIMFSMGTMLNVKQFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC VINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGTPIASRAALQEANRLLVEYHE HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEII HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHH HVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFV HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIVGMFAASIIGIFFMMKVLPGWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGET HHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC EEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC AASWSVPMIMFSMGTMLNVKQFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC VINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGTPIASRAALQEANRLLVEYHE HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEII HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHH HVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFV HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PIVGMFAASIIGIFFMMKVLPGWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGET HHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC EEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA