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The map label for this gene is ycbO [H]

Identifier: 126698224

GI number: 126698224

Start: 768417

End: 769097

Strand: Direct

Name: ycbO [H]

Synonym: CD0646

Alternate gene names: 126698224

Gene position: 768417-769097 (Clockwise)

Preceding gene: 126698223

Following gene: 126698225

Centisome position: 17.91

GC content: 24.82

Gene sequence:

>681_bases
ATGATAAATTTAATGAAACTAGAGCTAAAAAAAGTTGGGCTAAAAAGATATTTTTTATTTTCAATACTGGGGATTTTCTT
ATGTATGTTTTTTGTCTTTACTGGATTGAATGATAAATCTACTTCAATATATGATTATGATGTTACATTTAGTACAATCA
GTTTAGTTTTCTGTTTTTACTATATTATATTATTTGCTGTGTTGAATGTGGCATATATAATAAATGAATATACAAATAAA
ACAATCTTGATTTTATTCTCTTATCCACTTGACCGTAAAAAACTTATTTTATCAAAGTTACTTTTGATTACGACTCTTAT
GATATCATCAATGATAGTTGGATATATCTGTTGTTTTACATTCGTTGTTGTATTGGATAAGTATTTTAATTTAGTTATTG
GAGATTTTCATATTTCTATTTTATCTTATTGGATACCAGGAGCAATTAAAAGTATTATTGTATTTTGCTCATTAGGTATA
TGGACATTCGTTGTTGGAATGATAAGAAAATCAATACCTGTTACCCTTGTCAGTTCAATTATTTTTATCAATTTAAGACA
ATTTATTTTAGCTGGTACAAATACAACTCAAGACAGTTTGATTTCTGTTTTTATTATAGTTGGTATAACTGTGATTGGTA
TATATTATATACTAAATCATAAAGTTACTGAAATTGACTAG

Upstream 100 bases:

>100_bases
TTATTCAAAATCAAATTGGTATAAATAGCATTGGACGTAAACAAAGTTCTTTAGAAGATTACTTCTTCCAAACTACAGGT
ACAGGAGGTAAAGAAACACT

Downstream 100 bases:

>100_bases
ATACTGTGGCTAGGAAGGTAGTTATTAATTGTATCTTCTTGGGATAATAATGATTTGCTATTATATCAGCTATTATTAAT
ATTATTAGAGTTTTAATAAT

Product: lantibiotic ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MINLMKLELKKVGLKRYFLFSILGIFLCMFFVFTGLNDKSTSIYDYDVTFSTISLVFCFYYIILFAVLNVAYIINEYTNK
TILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFTFVVVLDKYFNLVIGDFHISILSYWIPGAIKSIIVFCSLGI
WTFVVGMIRKSIPVTLVSSIIFINLRQFILAGTNTTQDSLISVFIIVGITVIGIYYILNHKVTEID

Sequences:

>Translated_226_residues
MINLMKLELKKVGLKRYFLFSILGIFLCMFFVFTGLNDKSTSIYDYDVTFSTISLVFCFYYIILFAVLNVAYIINEYTNK
TILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFTFVVVLDKYFNLVIGDFHISILSYWIPGAIKSIIVFCSLGI
WTFVVGMIRKSIPVTLVSSIIFINLRQFILAGTNTTQDSLISVFIIVGITVIGIYYILNHKVTEID
>Mature_226_residues
MINLMKLELKKVGLKRYFLFSILGIFLCMFFVFTGLNDKSTSIYDYDVTFSTISLVFCFYYIILFAVLNVAYIINEYTNK
TILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFTFVVVLDKYFNLVIGDFHISILSYWIPGAIKSIIVFCSLGI
WTFVVGMIRKSIPVTLVSSIIFINLRQFILAGTNTTQDSLISVFIIVGITVIGIYYILNHKVTEID

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25868; Mature: 25868

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLMKLELKKVGLKRYFLFSILGIFLCMFFVFTGLNDKSTSIYDYDVTFSTISLVFCFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
YIILFAVLNVAYIINEYTNKTILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVVVLDKYFNLVIGDFHISILSYWIPGAIKSIIVFCSLGIWTFVVGMIRKSIPVTLVSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IFINLRQFILAGTNTTQDSLISVFIIVGITVIGIYYILNHKVTEID
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MINLMKLELKKVGLKRYFLFSILGIFLCMFFVFTGLNDKSTSIYDYDVTFSTISLVFCFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHH
YIILFAVLNVAYIINEYTNKTILILFSYPLDRKKLILSKLLLITTLMISSMIVGYICCFT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVVVLDKYFNLVIGDFHISILSYWIPGAIKSIIVFCSLGIWTFVVGMIRKSIPVTLVSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IFINLRQFILAGTNTTQDSLISVFIIVGITVIGIYYILNHKVTEID
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 10568751 [H]