Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126698217

Identifier: 126698217

GI number: 126698217

Start: 761770

End: 762891

Strand: Direct

Name: 126698217

Synonym: CD0639

Alternate gene names: NA

Gene position: 761770-762891 (Clockwise)

Preceding gene: 126698216

Following gene: 126698218

Centisome position: 17.76

GC content: 27.18

Gene sequence:

>1122_bases
ATGAAAGAAAAATTAGAAGAAAAATCTAAGATTATTAAAACATCAAAAGAGTATAAACGAACTATAATTGAAGAAAAAGA
CAGAGAATGGACCAAAAAATTAAATGACATACTTAGTAGAGGTGATTTTTCTAATGAAAAATTAGATAAAATCAAGGATT
TAATTCCAAAAGAAATATTGACTAGTGAAAATGTTGGAGAAGTTGTAACTGAAGATGGGTATGCTAAGCCTGAGTATGAT
GAGGTATTTAAATCATTGTTTACTTTAAATAATGATTACGATTTACTTGCAAATTTTATAAATGATATCCTCAAAGATGC
TCCATATGCTAATAGGAATATCAAACAGTTCACTCAAATAAAAAGAATAATTAAGGTTGAAACCGACCCAACAATTAATT
ACATTGGTGAGAAAAGACCTAGACTTGATATTTTGGCTGAAGATGAAGAACGTAACCATATAAATATTGAGATGCAAAGA
GCTCTTGAAGAGGATTATTTGGAAAGAGCTGAATATTATCTTAGTCGTGTACATGGTAGAAAGTTAGAAGAAGGTAAAGA
ATATAAAGAAATTGGAAAAACTGTTGGAATACATATACTAAATCATGTAAAATATAATCACATAGAAGATTATGTAAATT
GCCTGAGATTAACAATGGACGGGCATCCAGATATTTTTTCTAGTAAAACTGCATTATATTTTATAGAACTTCCAAAAATT
CGTAAATCCAGTTGTATAGCAAACAGAGTTCTAATATGGGGTAAACTTATTGATAATCCTTCTCATATAGATATTAGAAT
ACTATCTAAAACGGATTATGTTATTAAAAGAGCACTTGATAGATTAAAAGAATTAGGTAGTAATGAGGACTATTTATTAA
ATTTAAAGAGAGGTGCGTATATTATGAATAAAAGTAGAAATTTTAAAGAAGAAATTTTTCAAGAAGGTATTGAAAAAGGT
ATCGAAAAAGGTATCGAAAAAGGTATTGCAAAAGGGAAAAGAGAAGAGAAATTTAATATCATCATAAAATTAAAAAATAA
AGGATACAATTTGAGTGAAATATGCGATATTATAGATGATTTGAATAAATCAGAGGTTGAAAAAGTCTATAATCAAAACT
AA

Upstream 100 bases:

>100_bases
ATATAAGTTTATAAGGTTCTTATTTCAATAATGCAAATTTTACTTAGAAGTTCAGACTTTGGTATGAAGAAATGGGTAAT
AATAAAAAAGAGGTGTTGAT

Downstream 100 bases:

>100_bases
TACTATGATTGAGATGGCACTAGATAAATACAAAGCTTCCTCTTTTAAATTTAAATTAATATAAAACTTTGCTATTTAAA
TATGGTAGATATAAAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKEKLEEKSKIIKTSKEYKRTIIEEKDREWTKKLNDILSRGDFSNEKLDKIKDLIPKEILTSENVGEVVTEDGYAKPEYD
EVFKSLFTLNNDYDLLANFINDILKDAPYANRNIKQFTQIKRIIKVETDPTINYIGEKRPRLDILAEDEERNHINIEMQR
ALEEDYLERAEYYLSRVHGRKLEEGKEYKEIGKTVGIHILNHVKYNHIEDYVNCLRLTMDGHPDIFSSKTALYFIELPKI
RKSSCIANRVLIWGKLIDNPSHIDIRILSKTDYVIKRALDRLKELGSNEDYLLNLKRGAYIMNKSRNFKEEIFQEGIEKG
IEKGIEKGIAKGKREEKFNIIIKLKNKGYNLSEICDIIDDLNKSEVEKVYNQN

Sequences:

>Translated_373_residues
MKEKLEEKSKIIKTSKEYKRTIIEEKDREWTKKLNDILSRGDFSNEKLDKIKDLIPKEILTSENVGEVVTEDGYAKPEYD
EVFKSLFTLNNDYDLLANFINDILKDAPYANRNIKQFTQIKRIIKVETDPTINYIGEKRPRLDILAEDEERNHINIEMQR
ALEEDYLERAEYYLSRVHGRKLEEGKEYKEIGKTVGIHILNHVKYNHIEDYVNCLRLTMDGHPDIFSSKTALYFIELPKI
RKSSCIANRVLIWGKLIDNPSHIDIRILSKTDYVIKRALDRLKELGSNEDYLLNLKRGAYIMNKSRNFKEEIFQEGIEKG
IEKGIEKGIAKGKREEKFNIIIKLKNKGYNLSEICDIIDDLNKSEVEKVYNQN
>Mature_373_residues
MKEKLEEKSKIIKTSKEYKRTIIEEKDREWTKKLNDILSRGDFSNEKLDKIKDLIPKEILTSENVGEVVTEDGYAKPEYD
EVFKSLFTLNNDYDLLANFINDILKDAPYANRNIKQFTQIKRIIKVETDPTINYIGEKRPRLDILAEDEERNHINIEMQR
ALEEDYLERAEYYLSRVHGRKLEEGKEYKEIGKTVGIHILNHVKYNHIEDYVNCLRLTMDGHPDIFSSKTALYFIELPKI
RKSSCIANRVLIWGKLIDNPSHIDIRILSKTDYVIKRALDRLKELGSNEDYLLNLKRGAYIMNKSRNFKEEIFQEGIEKG
IEKGIEKGIAKGKREEKFNIIIKLKNKGYNLSEICDIIDDLNKSEVEKVYNQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43844; Mature: 43844

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKLEEKSKIIKTSKEYKRTIIEEKDREWTKKLNDILSRGDFSNEKLDKIKDLIPKEIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TSENVGEVVTEDGYAKPEYDEVFKSLFTLNNDYDLLANFINDILKDAPYANRNIKQFTQI
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KRIIKVETDPTINYIGEKRPRLDILAEDEERNHINIEMQRALEEDYLERAEYYLSRVHGR
HHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KLEEGKEYKEIGKTVGIHILNHVKYNHIEDYVNCLRLTMDGHPDIFSSKTALYFIELPKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH
RKSSCIANRVLIWGKLIDNPSHIDIRILSKTDYVIKRALDRLKELGSNEDYLLNLKRGAY
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
IMNKSRNFKEEIFQEGIEKGIEKGIEKGIAKGKREEKFNIIIKLKNKGYNLSEICDIIDD
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHC
LNKSEVEKVYNQN
CCHHHHHHHHCCC
>Mature Secondary Structure
MKEKLEEKSKIIKTSKEYKRTIIEEKDREWTKKLNDILSRGDFSNEKLDKIKDLIPKEIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TSENVGEVVTEDGYAKPEYDEVFKSLFTLNNDYDLLANFINDILKDAPYANRNIKQFTQI
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KRIIKVETDPTINYIGEKRPRLDILAEDEERNHINIEMQRALEEDYLERAEYYLSRVHGR
HHHHHCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KLEEGKEYKEIGKTVGIHILNHVKYNHIEDYVNCLRLTMDGHPDIFSSKTALYFIELPKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH
RKSSCIANRVLIWGKLIDNPSHIDIRILSKTDYVIKRALDRLKELGSNEDYLLNLKRGAY
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCEE
IMNKSRNFKEEIFQEGIEKGIEKGIEKGIAKGKREEKFNIIIKLKNKGYNLSEICDIIDD
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHC
LNKSEVEKVYNQN
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA