| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is cheR [H]
Identifier: 126698120
GI number: 126698120
Start: 646543
End: 647346
Strand: Direct
Name: cheR [H]
Synonym: CD0541
Alternate gene names: 126698120
Gene position: 646543-647346 (Clockwise)
Preceding gene: 126698119
Following gene: 126698121
Centisome position: 15.07
GC content: 26.0
Gene sequence:
>804_bases ATGATAAAACTCACAGATGAAGAATTTATAGTTCTTGTAAACCATGTAAAAAAAGAATATGGTATTGATTTAAGTAAAAA AAGAGCGTTAATTGAAGGTCGCTTATACAATACAATGATAGAGAAAAAACTTAGTTCTTTTAGTCAATATATGAATCTAT TATTTAAAGATAAGACAGGAAATGAAGCTATAAACCTAATAAATAGATTGAGTACTAACCACACATTTTTTATGAGAGAA CCTCAACATTTTGAGTTTATACAGAATAGTATACTTCCTTTTTGGGAAGAAAATAATAAAATAAGAAACATAAATATATG GAGTGCAGGATGTTCTAGTGGAGAAGAAGCGTATTCAATAGCTATGACTTTGGATGATTATTTTGGATATAATAAAGAGT TGTGGAACATTAAAATCATAGCCACAGATATTTCAACTAACTCACTTGAAAAAGCTAAAAGAGGTATATACATAGAATCA AATGTTAACAATGTTCCTGAGTTATGGAAGAAGAAGTATTTTATAGACAACAAGGATGGTACATTTAAAATTTGTGATAA GATTAGAAAAAGTGTAATTTTTAAGCCGTTTAATTTAATGAATGATTTCTCATATCAACATTTTGATTTGATTTTTTGTA GAAATGTTATGATTTATTTTGATTTAAAAACAAGAGAAGAACTTATAAATAAATTTTATAATGCTACCAAAAAAGATAGT TTTTTGTTTGTAGGACATGCAGAAGTAATCAACAGAAGTAGTACTAAATACAAATATGTAAAACCTGCTATATATAAACG ATAA
Upstream 100 bases:
>100_bases CGAAAGTTGAAGATAATTCTATATTAATTTTAGATATTCGAAAGTTTTTGATTAATAGTATATAGTTAGTTCTGATAAAT TAGCAGGAGGAAGTTTTTGC
Downstream 100 bases:
>100_bases AAAGGTATTTTTGATATATGATTTTTTGGAGGCGGTAATGTGGAACGTTTTAATAATATGGTTATTGCTATAGGCGCATC TGTAGGTGGTACAGAAGCAA
Product: chemotaxis protein methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MIKLTDEEFIVLVNHVKKEYGIDLSKKRALIEGRLYNTMIEKKLSSFSQYMNLLFKDKTGNEAINLINRLSTNHTFFMRE PQHFEFIQNSILPFWEENNKIRNINIWSAGCSSGEEAYSIAMTLDDYFGYNKELWNIKIIATDISTNSLEKAKRGIYIES NVNNVPELWKKKYFIDNKDGTFKICDKIRKSVIFKPFNLMNDFSYQHFDLIFCRNVMIYFDLKTREELINKFYNATKKDS FLFVGHAEVINRSSTKYKYVKPAIYKR
Sequences:
>Translated_267_residues MIKLTDEEFIVLVNHVKKEYGIDLSKKRALIEGRLYNTMIEKKLSSFSQYMNLLFKDKTGNEAINLINRLSTNHTFFMRE PQHFEFIQNSILPFWEENNKIRNINIWSAGCSSGEEAYSIAMTLDDYFGYNKELWNIKIIATDISTNSLEKAKRGIYIES NVNNVPELWKKKYFIDNKDGTFKICDKIRKSVIFKPFNLMNDFSYQHFDLIFCRNVMIYFDLKTREELINKFYNATKKDS FLFVGHAEVINRSSTKYKYVKPAIYKR >Mature_267_residues MIKLTDEEFIVLVNHVKKEYGIDLSKKRALIEGRLYNTMIEKKLSSFSQYMNLLFKDKTGNEAINLINRLSTNHTFFMRE PQHFEFIQNSILPFWEENNKIRNINIWSAGCSSGEEAYSIAMTLDDYFGYNKELWNIKIIATDISTNSLEKAKRGIYIES NVNNVPELWKKKYFIDNKDGTFKICDKIRKSVIFKPFNLMNDFSYQHFDLIFCRNVMIYFDLKTREELINKFYNATKKDS FLFVGHAEVINRSSTKYKYVKPAIYKR
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=253, Percent_Identity=35.1778656126482, Blast_Score=150, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 31696; Mature: 31696
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLTDEEFIVLVNHVKKEYGIDLSKKRALIEGRLYNTMIEKKLSSFSQYMNLLFKDKTG CEEECCCHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC NEAINLINRLSTNHTFFMREPQHFEFIQNSILPFWEENNKIRNINIWSAGCSSGEEAYSI CHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCCCCCEEE AMTLDDYFGYNKELWNIKIIATDISTNSLEKAKRGIYIESNVNNVPELWKKKYFIDNKDG EEEEHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCEEEECCCCCHHHHHHHHEEEECCCC TFKICDKIRKSVIFKPFNLMNDFSYQHFDLIFCRNVMIYFDLKTREELINKFYNATKKDS CHHHHHHHHHHHCCCCHHHHHCCCCHHHHHEEECCEEEEEECCHHHHHHHHHHCCCCCCC FLFVGHAEVINRSSTKYKYVKPAIYKR EEEEEHHHHHCCCCCCEEEECCHHCCC >Mature Secondary Structure MIKLTDEEFIVLVNHVKKEYGIDLSKKRALIEGRLYNTMIEKKLSSFSQYMNLLFKDKTG CEEECCCHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC NEAINLINRLSTNHTFFMREPQHFEFIQNSILPFWEENNKIRNINIWSAGCSSGEEAYSI CHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCCCCCEEE AMTLDDYFGYNKELWNIKIIATDISTNSLEKAKRGIYIESNVNNVPELWKKKYFIDNKDG EEEEHHHCCCCCEEEEEEEEEEECCCCHHHHHHCCEEEECCCCCHHHHHHHHEEEECCCC TFKICDKIRKSVIFKPFNLMNDFSYQHFDLIFCRNVMIYFDLKTREELINKFYNATKKDS CHHHHHHHHHHHCCCCHHHHHCCCCHHHHHEEECCEEEEEECCHHHHHHHHHHCCCCCCC FLFVGHAEVINRSSTKYKYVKPAIYKR EEEEEHHHHHCCCCCCEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]