Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is orf15 [H]

Identifier: 126698081

GI number: 126698081

Start: 593007

End: 595175

Strand: Direct

Name: orf15 [H]

Synonym: CD0503

Alternate gene names: 126698081

Gene position: 593007-595175 (Clockwise)

Preceding gene: 126698080

Following gene: 126698082

Centisome position: 13.82

GC content: 41.36

Gene sequence:

>2169_bases
ATGATGGTACAGAAATTAAAATCAAACTGGACTCTGAAGCGTCTAAATAAAGTGGCAATGACAGTGGTTTTATCACTCGT
GATTGCCATTTTTCTTTTAGCAATGTTGGGAACAGTGGTTCAAGCTGCGGGCTTGGTAGATGATACGGTCAATGTAGCAA
ATGAATACAGCCGATACCCACTTGAAAACTATCAACTGGATTTTTATGTTGATAATAGCTGGGGCTGGCTACCGTGGAAC
TGGTCGGACGGGATTGGAAAACAGGTCATGTATGGACTATATGCTATTACCAATTTTATTTGGACAATCAGTCTTTATGT
TTCCAATGCGACTGGCTACTTAGTTCAAGAAGCCTATTCCCTCGACTTCATTTCTGCTACAGCAGATTCCATTGGCAAGA
ATATGCAGACCCTTGCAGGAGTTACGCCTAGCGGACTATCAACAGAGGGATTCTATGTTGGATTCCTCTTACTCTTGATT
TTGGTTCTTGGGGTTTATGTTGTCTATACAGGACTGATAAAAAGAGAAACTACAAAAGCGATTCATGCCATTGTGAACTT
TGTCATGGTATTTATCCTATCAGCTTCCTTTATTGCCTATGCTCCCGACTACATTAAAAAAATCAATGATTTTTCATCAG
ACATCAGTCAAGCCAGCTTATCATTAGGAACGAAAATCGTCATGCCCCATTCAGACAGTCAAGGAAATGACAGTGTGGAC
TTGATACGTGACAGCCTATTTTCCATACAGGTTCAACAACCGTGGCTACTGCTTCAATACAACAGTTCAGACATTGAAAG
TATTGGTGCTGACCGTGTGGAAAGTCTACTTTCAACCAGTCCAGACAGTAATAATGGAGAAGACAGAGAAAAAATTGTAG
CAGAAGAAATCGAAGACAGAAACAATGTGAACATGACGATTACAAAAACTATTAACCGTTTGGGTACAGTCTTCTTTCTC
TTTGTATTCAATATCGGGATTTCTATATTCGTATTCCTACTAACAGGAATCATGATTTTCTCGCAGGTACTTTTTATCAT
CTATGCCATGTTTCTACCTGTTAGCTTTATTTTAAGCATGATTCCGTCCTTTGATGGTATGTCAAAACGAGCCATTATCA
AACTCTTTAATACCATTTTGACACGAGCTGGAATCACGCTGATTATTACGACAGCCTTTAGTATTTCAACCATGCTCTAT
ACCTTATCGGCTGGTTATCCGTTCTTTTTGATTGCCTTTTTACAGATTGTGACCTTTGCAGGAATCTACTTCAAACTGAG
CGATTTAATGAGTATGTTTTCGCTTCAAAGCAACGATTCTCAAAGTGTGGGAAGTCGTGTGATGAGAAAACCTCGTATGC
TTATGCACGCTCATATGCACCGCCTACAGCGTAAACTTGGACGCTCCATGACAGCTTTAGGTGCTGGCTCTGCCATTGCC
AGTGCTACAGGAAAACAAGGACAGTCGGGTAGTTCTGGTAGGACACAAGCAGATCACACCCGTCCAGACGGACAGGAAAA
ATCAACACTTGGAAAACGTATCGGACAAACAATCGGAGCAGTTGCTGATACCAAAGATAAAATCGTTGATTCTGCTGGTA
ATCTCAAAGAACAGGTTAAGGATATTCCGACCAATGCAAGATATGCAGTGTATCAAGGAAAATCCAAAGCAAAAGAAAAT
GTTCGTGACCTAACTTCCAGTATTTCTCAAACCAGAGCAGACAGAGCCAGCGGACGCAAGGAACAGCAGGAACAAAGACG
CAAAACCATTGCAGAGCGTCGCTCTGAAATGGAACAGGTCAAACAGAAAAAACAGCCAGCTTCTTCCGTTCATGAAAGAC
CAGCTACTAAGCAAGAACAATCTCATGATGGACAGACCGCAAAACAATCTTCTATTCAGACTTCACGCATGGAATCTCAA
CAAGCCAAACAGGAGCGTCCAGCAGTTAAGTCCGATTCTTTAAGTTTAAAAGCGGAACGACAAAACCGTACTACACAAGA
AAGAACAGTTCAAAAGCCAGCAACTTCAACTACACCAGCAGACAGAGCTTCACAACGTCCAGTCACAAAAGAGCGTCCGT
CTACTGTTCAAAGAGTTCAAAGCCAAAACCTTAGAAATAGACCACCAATAAAATCCGCCACTATCAAGAAAGGCAGTAAG
AAACCATGA

Upstream 100 bases:

>100_bases
GTGATTTATATGGTCGTGTCGGTGTGATACAGTTCCACCCAGTCTTTGAAGAATTACTTCATGCTTTTGATACCAGACCG
CCTGTGAGAAAAGAGGTGTA

Downstream 100 bases:

>100_bases
AACTGAAAGCTTTAGTGATTGGTGGTTCTGGGCTATTCTTGATGGTCTTCTCACTACTTCTGTTTGTTGCCATTTTATTT
TCAGATGAACAAGATGGCGG

Product: conjugative transposon membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MMVQKLKSNWTLKRLNKVAMTVVLSLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPWN
WSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLAGVTPSGLSTEGFYVGFLLLLI
LVLGVYVVYTGLIKRETTKAIHAIVNFVMVFILSASFIAYAPDYIKKINDFSSDISQASLSLGTKIVMPHSDSQGNDSVD
LIRDSLFSIQVQQPWLLLQYNSSDIESIGADRVESLLSTSPDSNNGEDREKIVAEEIEDRNNVNMTITKTINRLGTVFFL
FVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAIIKLFNTILTRAGITLIITTAFSISTMLY
TLSAGYPFFLIAFLQIVTFAGIYFKLSDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTALGAGSAIA
SATGKQGQSGSSGRTQADHTRPDGQEKSTLGKRIGQTIGAVADTKDKIVDSAGNLKEQVKDIPTNARYAVYQGKSKAKEN
VRDLTSSISQTRADRASGRKEQQEQRRKTIAERRSEMEQVKQKKQPASSVHERPATKQEQSHDGQTAKQSSIQTSRMESQ
QAKQERPAVKSDSLSLKAERQNRTTQERTVQKPATSTTPADRASQRPVTKERPSTVQRVQSQNLRNRPPIKSATIKKGSK
KP

Sequences:

>Translated_722_residues
MMVQKLKSNWTLKRLNKVAMTVVLSLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPWN
WSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLAGVTPSGLSTEGFYVGFLLLLI
LVLGVYVVYTGLIKRETTKAIHAIVNFVMVFILSASFIAYAPDYIKKINDFSSDISQASLSLGTKIVMPHSDSQGNDSVD
LIRDSLFSIQVQQPWLLLQYNSSDIESIGADRVESLLSTSPDSNNGEDREKIVAEEIEDRNNVNMTITKTINRLGTVFFL
FVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAIIKLFNTILTRAGITLIITTAFSISTMLY
TLSAGYPFFLIAFLQIVTFAGIYFKLSDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTALGAGSAIA
SATGKQGQSGSSGRTQADHTRPDGQEKSTLGKRIGQTIGAVADTKDKIVDSAGNLKEQVKDIPTNARYAVYQGKSKAKEN
VRDLTSSISQTRADRASGRKEQQEQRRKTIAERRSEMEQVKQKKQPASSVHERPATKQEQSHDGQTAKQSSIQTSRMESQ
QAKQERPAVKSDSLSLKAERQNRTTQERTVQKPATSTTPADRASQRPVTKERPSTVQRVQSQNLRNRPPIKSATIKKGSK
KP
>Mature_722_residues
MMVQKLKSNWTLKRLNKVAMTVVLSLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPWN
WSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLAGVTPSGLSTEGFYVGFLLLLI
LVLGVYVVYTGLIKRETTKAIHAIVNFVMVFILSASFIAYAPDYIKKINDFSSDISQASLSLGTKIVMPHSDSQGNDSVD
LIRDSLFSIQVQQPWLLLQYNSSDIESIGADRVESLLSTSPDSNNGEDREKIVAEEIEDRNNVNMTITKTINRLGTVFFL
FVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAIIKLFNTILTRAGITLIITTAFSISTMLY
TLSAGYPFFLIAFLQIVTFAGIYFKLSDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTALGAGSAIA
SATGKQGQSGSSGRTQADHTRPDGQEKSTLGKRIGQTIGAVADTKDKIVDSAGNLKEQVKDIPTNARYAVYQGKSKAKEN
VRDLTSSISQTRADRASGRKEQQEQRRKTIAERRSEMEQVKQKKQPASSVHERPATKQEQSHDGQTAKQSSIQTSRMESQ
QAKQERPAVKSDSLSLKAERQNRTTQERTVQKPATSTTPADRASQRPVTKERPSTVQRVQSQNLRNRPPIKSATIKKGSK
KP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80238; Mature: 80238

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVQKLKSNWTLKRLNKVAMTVVLSLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYP
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LENYQLDFYVDNSWGWLPWNWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYS
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LDFISATADSIGKNMQTLAGVTPSGLSTEGFYVGFLLLLILVLGVYVVYTGLIKRETTKA
HHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHAIVNFVMVFILSASFIAYAPDYIKKINDFSSDISQASLSLGTKIVMPHSDSQGNDSVD
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
LIRDSLFSIQVQQPWLLLQYNSSDIESIGADRVESLLSTSPDSNNGEDREKIVAEEIEDR
HHHHHHHHEEECCCEEEEEECCCCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
NNVNMTITKTINRLGTVFFLFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSM
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPSFDGMSKRAIIKLFNTILTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIVTFA
HCCCCCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GIYFKLSDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTALGAGSAIA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHH
SATGKQGQSGSSGRTQADHTRPDGQEKSTLGKRIGQTIGAVADTKDKIVDSAGNLKEQVK
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH
DIPTNARYAVYQGKSKAKENVRDLTSSISQTRADRASGRKEQQEQRRKTIAERRSEMEQV
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KQKKQPASSVHERPATKQEQSHDGQTAKQSSIQTSRMESQQAKQERPAVKSDSLSLKAER
HHHCCCHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH
QNRTTQERTVQKPATSTTPADRASQRPVTKERPSTVQRVQSQNLRNRPPIKSATIKKGSK
HCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCC
KP
CC
>Mature Secondary Structure
MMVQKLKSNWTLKRLNKVAMTVVLSLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYP
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LENYQLDFYVDNSWGWLPWNWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYS
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LDFISATADSIGKNMQTLAGVTPSGLSTEGFYVGFLLLLILVLGVYVVYTGLIKRETTKA
HHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHAIVNFVMVFILSASFIAYAPDYIKKINDFSSDISQASLSLGTKIVMPHSDSQGNDSVD
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
LIRDSLFSIQVQQPWLLLQYNSSDIESIGADRVESLLSTSPDSNNGEDREKIVAEEIEDR
HHHHHHHHEEECCCEEEEEECCCCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
NNVNMTITKTINRLGTVFFLFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSM
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPSFDGMSKRAIIKLFNTILTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIVTFA
HCCCCCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GIYFKLSDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTALGAGSAIA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHH
SATGKQGQSGSSGRTQADHTRPDGQEKSTLGKRIGQTIGAVADTKDKIVDSAGNLKEQVK
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHH
DIPTNARYAVYQGKSKAKENVRDLTSSISQTRADRASGRKEQQEQRRKTIAERRSEMEQV
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KQKKQPASSVHERPATKQEQSHDGQTAKQSSIQTSRMESQQAKQERPAVKSDSLSLKAER
HHHCCCHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH
QNRTTQERTVQKPATSTTPADRASQRPVTKERPSTVQRVQSQNLRNRPPIKSATIKKGSK
HCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCC
KP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]