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The map label for this gene is sorB [H]

Identifier: 126698069

GI number: 126698069

Start: 582091

End: 582564

Strand: Direct

Name: sorB [H]

Synonym: CD0492

Alternate gene names: 126698069

Gene position: 582091-582564 (Clockwise)

Preceding gene: 126698068

Following gene: 126698070

Centisome position: 13.57

GC content: 31.43

Gene sequence:

>474_bases
ATGAGTAATATAGCATTAACAAGAATTGATGATAGATTAATACATGGGCAAGTTATTACTGCTTGGTGTAAGATTACATC
AGCAAAAAGGATAGTAATCGTGGATGATTTAGTAGTAAAGGACCCATTTATAGTTCAAGTTTTACAAATGGCAGCTCCAT
CAACTGTTAAGGTTGAAGTACATGATGTAGAATCAGGTGCTGAAGTCTTAAAATCACATAATGGAGATGAAAATTTAATA
GTATTGGTCAAATACCCTAAAACTGTCTTAGGTTTAGTAAATAGCGGGGTAGATTTAAAGGAATTGAATGTTGGAGGTAT
GGGAGCAGGGCTTGGTAGAAAAAGTTTTTATAAAAATATATCTGTGTCAGATGAAGAAAAAGAAATATTTAGAGAGCTAA
TATCAAAAGATGTTAAATGCTTTATACAAATAGTACCAGATGCAAAGAAAATTGATGTAGGAACATTATTGTAA

Upstream 100 bases:

>100_bases
GACTTGAAGAATTTATGTGAGGAAGTTGGGATATCAGGAATCAAAGATGTTAAAACTGTTTTAAAGTTGTAAAATAAATT
AAAAATCTGGAGGAATAATT

Downstream 100 bases:

>100_bases
AGAAGACTATCTTGTAAATCTTTAAAAGAAAATAGGGAGGAAGAATATGCACATTTCACTAATTCAAGCAGTATTAATAG
CAATTTTTTATTATCTTTCT

Product: PTS system transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Sor; EIII-B-Sor; PTS system sorbose-specific EIIB component [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSNIALTRIDDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEVHDVESGAEVLKSHNGDENLI
VLVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNISVSDEEKEIFRELISKDVKCFIQIVPDAKKIDVGTLL

Sequences:

>Translated_157_residues
MSNIALTRIDDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEVHDVESGAEVLKSHNGDENLI
VLVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNISVSDEEKEIFRELISKDVKCFIQIVPDAKKIDVGTLL
>Mature_156_residues
SNIALTRIDDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEVHDVESGAEVLKSHNGDENLIV
LVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNISVSDEEKEIFRELISKDVKCFIQIVPDAKKIDVGTLL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI87082217, Length=157, Percent_Identity=30.5732484076433, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788120, Length=157, Percent_Identity=35.031847133758, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1789527, Length=149, Percent_Identity=32.8859060402685, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 17212; Mature: 17081

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIALTRIDDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEV
CCCCEEEECCCHHHCCHHHEEEEECCCCCEEEEECCEECCCHHHHHHHHHCCCCEEEEEE
HDVESGAEVLKSHNGDENLIVLVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNI
EECCHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCC
SVSDEEKEIFRELISKDVKCFIQIVPDAKKIDVGTLL
CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SNIALTRIDDRLIHGQVITAWCKITSAKRIVIVDDLVVKDPFIVQVLQMAAPSTVKVEV
CCCEEEECCCHHHCCHHHEEEEECCCCCEEEEECCEECCCHHHHHHHHHCCCCEEEEEE
HDVESGAEVLKSHNGDENLIVLVKYPKTVLGLVNSGVDLKELNVGGMGAGLGRKSFYKNI
EECCHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCC
SVSDEEKEIFRELISKDVKCFIQIVPDAKKIDVGTLL
CCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]