| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is manX [H]
Identifier: 126698068
GI number: 126698068
Start: 581655
End: 582062
Strand: Direct
Name: manX [H]
Synonym: CD0491
Alternate gene names: 126698068
Gene position: 581655-582062 (Clockwise)
Preceding gene: 126698067
Following gene: 126698069
Centisome position: 13.56
GC content: 30.88
Gene sequence:
>408_bases ATGGCAGGAATAATTATAGCCACACATGGAAATATGGCTAAAGCAATGTTAGAAAGTGCTGAATTAATAGTAGGCAAACA GGAAAATGTAGAAACTTTAGGATTAAACCATGGTGACAGCATAGATGAGTTTAGTAGAAAGTTAGAAGATGGAATTGAGA AATATAAGGATGAAGGGGTTTTAGTATTGCTTGATTTTTATGGCGGAACTCCATTTAATACATCTGCTATTATAATAAAT AAATTTGCTAAGGTATGTGAGTTAGAATGTTTGACAGGTGTAAATTTACCTATGCTTTTAGAGTTATTTTTAAACAGAGA TACTATGAAGTTAAAAGACTTGAAGAATTTATGTGAGGAAGTTGGGATATCAGGAATCAAAGATGTTAAAACTGTTTTAA AGTTGTAA
Upstream 100 bases:
>100_bases AGGGATATTTTCTTTGGTAAGATAATGATTAATATAGATAATTAGATTAGAGTACTAAATAATAATCCATATAAAAAAGG TTAAGAAAGGTATGATTCAT
Downstream 100 bases:
>100_bases AATAAATTAAAAATCTGGAGGAATAATTATGAGTAATATAGCATTAACAAGAATTGATGATAGATTAATACATGGGCAAG TTATTACTGCTTGGTGTAAG
Product: PTS system transporter subunit IIA
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAGIIIATHGNMAKAMLESAELIVGKQENVETLGLNHGDSIDEFSRKLEDGIEKYKDEGVLVLLDFYGGTPFNTSAIIIN KFAKVCELECLTGVNLPMLLELFLNRDTMKLKDLKNLCEEVGISGIKDVKTVLKL
Sequences:
>Translated_135_residues MAGIIIATHGNMAKAMLESAELIVGKQENVETLGLNHGDSIDEFSRKLEDGIEKYKDEGVLVLLDFYGGTPFNTSAIIIN KFAKVCELECLTGVNLPMLLELFLNRDTMKLKDLKNLCEEVGISGIKDVKTVLKL >Mature_134_residues AGIIIATHGNMAKAMLESAELIVGKQENVETLGLNHGDSIDEFSRKLEDGIEKYKDEGVLVLLDFYGGTPFNTSAIIINK FAKVCELECLTGVNLPMLLELFLNRDTMKLKDLKNLCEEVGISGIKDVKTVLKL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=131, Percent_Identity=35.8778625954198, Blast_Score=77, Evalue=5e-16,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 14859; Mature: 14727
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIIIATHGNMAKAMLESAELIVGKQENVETLGLNHGDSIDEFSRKLEDGIEKYKDEGV CCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCE LVLLDFYGGTPFNTSAIIINKFAKVCELECLTGVNLPMLLELFLNRDTMKLKDLKNLCEE EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH VGISGIKDVKTVLKL HCCCCHHHHHHHHCC >Mature Secondary Structure AGIIIATHGNMAKAMLESAELIVGKQENVETLGLNHGDSIDEFSRKLEDGIEKYKDEGV CCEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCE LVLLDFYGGTPFNTSAIIINKFAKVCELECLTGVNLPMLLELFLNRDTMKLKDLKNLCEE EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH VGISGIKDVKTVLKL HCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]