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The map label for this gene is 126698048

Identifier: 126698048

GI number: 126698048

Start: 562847

End: 563524

Strand: Direct

Name: 126698048

Synonym: CD0472

Alternate gene names: NA

Gene position: 562847-563524 (Clockwise)

Preceding gene: 126698045

Following gene: 126698049

Centisome position: 13.12

GC content: 28.76

Gene sequence:

>678_bases
ATGATAATTACAGTTATAAATGGAAGCCCTAGAAAAAATGGAGCTACATCAAAAGTTTTAACTTACTTGTATAAAGATAT
AGAAAGATTAATACCAGATGTAAAAATTAATTATTTTGATTTAAGTGAGGTAAATCCATCATATTGTATTGGTTGTTTAA
ATTGTTATAAAATGGGCAAGTGTATCAATCAAAATGATAAAGTAGAGTATATTCATGATATAATTACTAAGAGTGATGGT
GTTATATTTGGTAGCCCAACTTATGGAAGTAGTGTAACTGGACTTTTCAAGGTGTTTACAGATAGAGCACATATGATGCT
TGAAAGATTATTGTATCGTAAGCCATGTATAGCAGTTACTACATATGAAAATGCACGTGGTTCAAAAGCAATTTCTTTTA
TAAAATCCATGGTCTTAGATTCGGGAGGTTATGTTTGTGGTAGTTTATCTATAAAAACTGGATTTAATCAAAATCCTATA
ACTGAAAAAGTAGAATCAAAGATACAAAAGGTATCTAAAAAATTTATTTATTGCATAGAGGAAAAGAAAAATCCACCTGT
GCTTTCTCAAATCTATAATTTTATTGCTATAAATGCTGTTTTAAAGCCAATGGCTTTTAAAGATATTGAGCAATATAAGG
GAATAATTGATAGATGGGAGGAGCAAGGGATTATTTAA

Upstream 100 bases:

>100_bases
GCTGTGTAAGTATAGCTTTAAATAAATGGTTTATATTGACAGCTAAAATTATAGTTGATATACTTATTGTTGATATAACA
ACTAAAAAGGAGATATAGAA

Downstream 100 bases:

>100_bases
ATGGAGGTAAAATGAAAGATTTTGAGAAACTATATGAAGCTACAACTAAGTTAGTAAGTACTTCGTTAAAAGTAAAAGAT
GATTTAAAAAAGATGTTTAA

Product: iron-sulfur flavoprotein

Products: NA

Alternate protein names: Isf; Cd1; CD

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEVNPSYCIGCLNCYKMGKCINQNDKVEYIHDIITKSDG
VIFGSPTYGSSVTGLFKVFTDRAHMMLERLLYRKPCIAVTTYENARGSKAISFIKSMVLDSGGYVCGSLSIKTGFNQNPI
TEKVESKIQKVSKKFIYCIEEKKNPPVLSQIYNFIAINAVLKPMAFKDIEQYKGIIDRWEEQGII

Sequences:

>Translated_225_residues
MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEVNPSYCIGCLNCYKMGKCINQNDKVEYIHDIITKSDG
VIFGSPTYGSSVTGLFKVFTDRAHMMLERLLYRKPCIAVTTYENARGSKAISFIKSMVLDSGGYVCGSLSIKTGFNQNPI
TEKVESKIQKVSKKFIYCIEEKKNPPVLSQIYNFIAINAVLKPMAFKDIEQYKGIIDRWEEQGII
>Mature_225_residues
MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEVNPSYCIGCLNCYKMGKCINQNDKVEYIHDIITKSDG
VIFGSPTYGSSVTGLFKVFTDRAHMMLERLLYRKPCIAVTTYENARGSKAISFIKSMVLDSGGYVCGSLSIKTGFNQNPI
TEKVESKIQKVSKKFIYCIEEKKNPPVLSQIYNFIAINAVLKPMAFKDIEQYKGIIDRWEEQGII

Specific function: Redox-active protein probably involved in electron transport

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ISF_CLOD6 (Q188R7)

Other databases:

- EMBL:   AM180355
- RefSeq:   YP_001086945.1
- ProteinModelPortal:   Q188R7
- STRING:   Q188R7
- GeneID:   4914243
- GenomeReviews:   AM180355_GR
- KEGG:   cdf:CD0472
- NMPDR:   fig|1496.1.peg.360
- eggNOG:   COG0655
- HOGENOM:   HBG532696
- OMA:   NFIAINA
- ProtClustDB:   CLSK629149
- InterPro:   IPR005025

Pfam domain/function: PF03358 FMN_red

EC number: NA

Molecular weight: Translated: 25445; Mature: 25445

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEVNPSYCIGCLNCYKMGK
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
CINQNDKVEYIHDIITKSDGVIFGSPTYGSSVTGLFKVFTDRAHMMLERLLYRKPCIAVT
HCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TYENARGSKAISFIKSMVLDSGGYVCGSLSIKTGFNQNPITEKVESKIQKVSKKFIYCIE
ECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEHEE
EKKNPPVLSQIYNFIAINAVLKPMAFKDIEQYKGIIDRWEEQGII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIITVINGSPRKNGATSKVLTYLYKDIERLIPDVKINYFDLSEVNPSYCIGCLNCYKMGK
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
CINQNDKVEYIHDIITKSDGVIFGSPTYGSSVTGLFKVFTDRAHMMLERLLYRKPCIAVT
HCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TYENARGSKAISFIKSMVLDSGGYVCGSLSIKTGFNQNPITEKVESKIQKVSKKFIYCIE
ECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEHEE
EKKNPPVLSQIYNFIAINAVLKPMAFKDIEQYKGIIDRWEEQGII
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA