| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is yxeH [H]
Identifier: 126698043
GI number: 126698043
Start: 555693
End: 556514
Strand: Direct
Name: yxeH [H]
Synonym: CD0467
Alternate gene names: 126698043
Gene position: 555693-556514 (Clockwise)
Preceding gene: 126698042
Following gene: 126698044
Centisome position: 12.95
GC content: 28.22
Gene sequence:
>822_bases ATGAAATTGTACAAATTATTAATACTTGATATAGATGGTACGCTTAGAGATGAGGTATATGGAATCCCAGAATCTGCAAA GCATGCTATACGTTTATGTCAAAAGAATCATTGCAGTGTTGTTATTTGTACTGGAAGAAGTATGGGTACAATACAAGATG ATGTTTTATCATTAGGAGTTGATGGATATATTGCAGGAGGAGGTAATTACATTCAATATCATGGTGAATTACTTTATAAT CAATCTTTTAATCAAAGATTGATAAAGGAAGTTGTTTGTTTATTAAAAAAGAGAGAAGTTGCTTTTTCGATTGAGAGTCA GGAAAAAGTTTTCATGAATCAAAAAGCCAAAGAAATATTTGAAACAATGAATCAGTTAAAAGGAACTAATTCTTGTATAA ATAAACAACATATCCAAGAAAAAATAACATATGAAAATAACATTGAAGAGTATAAGTCACAAGATATACATAAAATTTGT TTATGGTCAAATGAAAAGGTATTTGACGAAGTGAAAGATATACTACAAGATAAAATGGAATTAGCACAGAGAGATATTTC TAGTCAGTATTATGAAATTATTCAAAAAGATTTTCATAAGGGCAAAGCAATTAAGAGATTACAAGAAAGATTAGGAGTAA CTCAAAAAGAAACCATATGTTTTGGTGATGGTCAAAATGACATTGTCATGTTTCAAGCATCAGACGTTACAATTGCAATG AAAAATAGTCATCAACAACTTAAAGATATAGCGACATCTATATGTGAGGACATATTCGATAATGGAATTTATAAAGAATT AAAAAGAAGAAATATCATATAA
Upstream 100 bases:
>100_bases GAAAATTTGTGCTAAAAATGAACATATTTTTTAAAAGATATCAAAATATTGATATCTTTTTTTTTGAATGCTATTATGAT TTTGATAGTAAGAAAGGAAG
Downstream 100 bases:
>100_bases AAAGGAGTAATTTATGGAAAAGAAATGGTGGCAAAAAGAAATCGTTTATCAAATTTATCCAAGAAGCTTTCAAGATAGTA ATAATGATGGAATTGGAGAT
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYN QSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKIC LWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM KNSHQQLKDIATSICEDIFDNGIYKELKRRNII
Sequences:
>Translated_273_residues MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYN QSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKIC LWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM KNSHQQLKDIATSICEDIFDNGIYKELKRRNII >Mature_273_residues MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYN QSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKIC LWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM KNSHQQLKDIATSICEDIFDNGIYKELKRRNII
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=273, Percent_Identity=22.7106227106227, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 31546; Mature: 31546
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGV CCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCC DGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIF CEEEECCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH ETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSNEKVFDEVKDILQDKME HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHH LAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCEEEEE KNSHQQLKDIATSICEDIFDNGIYKELKRRNII CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MKLYKLLILDIDGTLRDEVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGV CCEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCC DGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIF CEEEECCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH ETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSNEKVFDEVKDILQDKME HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHH LAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCEEEEE KNSHQQLKDIATSICEDIFDNGIYKELKRRNII CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]