| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698017
Identifier: 126698017
GI number: 126698017
Start: 527157
End: 527465
Strand: Direct
Name: 126698017
Synonym: CD0443
Alternate gene names: NA
Gene position: 527157-527465 (Clockwise)
Preceding gene: 126698016
Following gene: 126698018
Centisome position: 12.29
GC content: 31.39
Gene sequence:
>309_bases ATGGATGCTAAAATTAATGATTGGGTTATTATACACAACATAGTGCTGACTCCAGAAGAAAGAGCCGCACAAGTTCCAGA GGATACTAAGAAAGTATCCTTAGAAATGTGGGTTAAAGGTTTTATACAAAGTGATGCTTCTATAGGCGACTTAGTAGAAG TTAAAACAATTACAGGTAGACTTGTAAAAGGTAATTTACTTAAAATAAATCCATATTATACTCATGATTATGGTAAATGT ATACCAGAGTTACTCCAAATAGGAATCCAAGCTAAAGAAATATTATTTGGAGGTGTATATAATGAATAA
Upstream 100 bases:
>100_bases GAAGAAGAATCAAAGGCTAATTAGTAAAATAATAGTTAATTAATAAAATAGCAGTAAACTAATTAGTAAAATAATAGTCA ATTAATAAGGGGATGAAAAA
Downstream 100 bases:
>100_bases TTCAACATCAATGAAAGATATGAGTTATCAAGCTGTTATGGGAAGAAATAACGAAATAATGAAAAATGCAATCGGATTGG ATTATTCTTCTTTTGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MDAKINDWVIIHNIVLTPEERAAQVPEDTKKVSLEMWVKGFIQSDASIGDLVEVKTITGRLVKGNLLKINPYYTHDYGKC IPELLQIGIQAKEILFGGVYNE
Sequences:
>Translated_102_residues MDAKINDWVIIHNIVLTPEERAAQVPEDTKKVSLEMWVKGFIQSDASIGDLVEVKTITGRLVKGNLLKINPYYTHDYGKC IPELLQIGIQAKEILFGGVYNE >Mature_102_residues MDAKINDWVIIHNIVLTPEERAAQVPEDTKKVSLEMWVKGFIQSDASIGDLVEVKTITGRLVKGNLLKINPYYTHDYGKC IPELLQIGIQAKEILFGGVYNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11485; Mature: 11485
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKINDWVIIHNIVLTPEERAAQVPEDTKKVSLEMWVKGFIQSDASIGDLVEVKTITGR CCCCCCCEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCE LVKGNLLKINPYYTHDYGKCIPELLQIGIQAKEILFGGVYNE EEECCEEEECCEEECCHHHHHHHHHHCCCCHHHHEECCCCCC >Mature Secondary Structure MDAKINDWVIIHNIVLTPEERAAQVPEDTKKVSLEMWVKGFIQSDASIGDLVEVKTITGR CCCCCCCEEEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCE LVKGNLLKINPYYTHDYGKCIPELLQIGIQAKEILFGGVYNE EEECCEEEECCEEECCHHHHHHHHHHCCCCHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA