| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126698011
Identifier: 126698011
GI number: 126698011
Start: 520353
End: 521387
Strand: Direct
Name: 126698011
Synonym: CD0438
Alternate gene names: NA
Gene position: 520353-521387 (Clockwise)
Preceding gene: 126698010
Following gene: 126698012
Centisome position: 12.13
GC content: 31.5
Gene sequence:
>1035_bases ATGTTTAAGAAAAAGTTAATAGCTGTTGCAATGAGTATAACTATGATTAGTGTAGGGAGCTTTTCGTATGCTCATTCAGG AAGAACTGATTCATCAGGAGGTCATCGTGATAATAAAAATAAATCTGGATTAGGAAGTTATCACTATCATTGTGGTGGTT ATCCAGCTCATTTACATAATAATGGTGGTTGTCCTTATACTGGAGGAGGAAGCAGTTCTGGAACAGCAACTTCGGTTAAT AATGAAGAAAAGCAAAAGAGGTCTGTTGGAGAAAAAGGATATAATCAAGGGTATGAAGATGGGTATAAAGGAAATTATAG TTCATCAAATTATAGTGGAGATTATAGTGATACATATGAATCAAAGTACTCAGAAGGATATGAAAAAGGTAAGGCTAAAT TAGAAGAGGAAGAAAAGGTGGCTAAAGAGACTGGATATAATTTAGGGCTTACAGGTGCTAAATCTAATAATACATATGAA AAAGAAGTTTTAAAAAATGCTTATGATACCGGATATTCAACTGGATACAATGAATATAAGACTAAAAAGATAGAAGAATA TAAAGCTAAAGGGATAGAGGATAGCAATAAAGATAAGGAAAAAATGACATTTGAAGAAAACATAGATTCTGAATTTATAG ATGCTTATAATAATGCTTATGACGAAATACAAGAACAATTAAAAAATGATTACACTACTCAAGGATTTGAGAGTGCTATC AAAGGAGAAAGATTTGACACATCAACTATAGGTAATGTTAAATATGCTAATTGGTTTAAAGAAGGATATGATAATGGTAA GGTTAAGTTACCTAAAGCAAAAGAAAGTGTATATAATCAAGGTTACAATGAAGAAGATTTTAGTATACCAGATGAAATGA AGTCTATTGAAACTAAGTTAAAAGGTGTATATGATGAAGGTTTAGAAAAAAGAGAGGAAGAGAAAAGTAGAAATGCTACT TATGGGGTTGGAGCTGGAACAGCAGCTGTAGTTGCTGGAGTAGTATATAAGAAGAAAAAACGTAAAAAGATATAG
Upstream 100 bases:
>100_bases ACAATTCATCAAATATTTACATTGTCGAATTTTAACGGTTTAAACATAATATATTGACTGATATAATAAAATCATAGAAT ATTTTAGGGGGAAATAGATT
Downstream 100 bases:
>100_bases ATGCTAGATATACCAATGATGGCAAGTGTATAACAAATATAATTTTAAGTATAAATATTTAAAATATAGAAGGGAAGGTT ATATCTATGGGATTTAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGLGSYHYHCGGYPAHLHNNGGCPYTGGGSSSGTATSVN NEEKQKRSVGEKGYNQGYEDGYKGNYSSSNYSGDYSDTYESKYSEGYEKGKAKLEEEEKVAKETGYNLGLTGAKSNNTYE KEVLKNAYDTGYSTGYNEYKTKKIEEYKAKGIEDSNKDKEKMTFEENIDSEFIDAYNNAYDEIQEQLKNDYTTQGFESAI KGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKESVYNQGYNEEDFSIPDEMKSIETKLKGVYDEGLEKREEEKSRNAT YGVGAGTAAVVAGVVYKKKKRKKI
Sequences:
>Translated_344_residues MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGLGSYHYHCGGYPAHLHNNGGCPYTGGGSSSGTATSVN NEEKQKRSVGEKGYNQGYEDGYKGNYSSSNYSGDYSDTYESKYSEGYEKGKAKLEEEEKVAKETGYNLGLTGAKSNNTYE KEVLKNAYDTGYSTGYNEYKTKKIEEYKAKGIEDSNKDKEKMTFEENIDSEFIDAYNNAYDEIQEQLKNDYTTQGFESAI KGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKESVYNQGYNEEDFSIPDEMKSIETKLKGVYDEGLEKREEEKSRNAT YGVGAGTAAVVAGVVYKKKKRKKI >Mature_344_residues MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGLGSYHYHCGGYPAHLHNNGGCPYTGGGSSSGTATSVN NEEKQKRSVGEKGYNQGYEDGYKGNYSSSNYSGDYSDTYESKYSEGYEKGKAKLEEEEKVAKETGYNLGLTGAKSNNTYE KEVLKNAYDTGYSTGYNEYKTKKIEEYKAKGIEDSNKDKEKMTFEENIDSEFIDAYNNAYDEIQEQLKNDYTTQGFESAI KGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKESVYNQGYNEEDFSIPDEMKSIETKLKGVYDEGLEKREEEKSRNAT YGVGAGTAAVVAGVVYKKKKRKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38358; Mature: 38358
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGLGSYHYHCGGYPAHLHN CCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEC NGGCPYTGGGSSSGTATSVNNEEKQKRSVGEKGYNQGYEDGYKGNYSSSNYSGDYSDTYE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH SKYSEGYEKGKAKLEEEEKVAKETGYNLGLTGAKSNNTYEKEVLKNAYDTGYSTGYNEYK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHH TKKIEEYKAKGIEDSNKDKEKMTFEENIDSEFIDAYNNAYDEIQEQLKNDYTTQGFESAI HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKESVYNQGYNEEDFSIPDEMKSIETKL CCCCCCCCCCCCCHHHHHHHHCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH KGVYDEGLEKREEEKSRNATYGVGAGTAAVVAGVVYKKKKRKKI HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFKKKLIAVAMSITMISVGSFSYAHSGRTDSSGGHRDNKNKSGLGSYHYHCGGYPAHLHN CCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEC NGGCPYTGGGSSSGTATSVNNEEKQKRSVGEKGYNQGYEDGYKGNYSSSNYSGDYSDTYE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH SKYSEGYEKGKAKLEEEEKVAKETGYNLGLTGAKSNNTYEKEVLKNAYDTGYSTGYNEYK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHH TKKIEEYKAKGIEDSNKDKEKMTFEENIDSEFIDAYNNAYDEIQEQLKNDYTTQGFESAI HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KGERFDTSTIGNVKYANWFKEGYDNGKVKLPKAKESVYNQGYNEEDFSIPDEMKSIETKL CCCCCCCCCCCCCHHHHHHHHCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH KGVYDEGLEKREEEKSRNATYGVGAGTAAVVAGVVYKKKKRKKI HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA