| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697919
Identifier: 126697919
GI number: 126697919
Start: 422833
End: 423795
Strand: Direct
Name: 126697919
Synonym: CD0347
Alternate gene names: NA
Gene position: 422833-423795 (Clockwise)
Preceding gene: 126697918
Following gene: 126697920
Centisome position: 9.86
GC content: 23.88
Gene sequence:
>963_bases TTGAGAAAGGAGACACGACTTATGAGGTGGATATTAGTTTTTATATTTTTATATCTTATTCCTTTAGTAGTGATATTCAG AAATTACAAGAATTTTAAGAGGTCTTGTATCTACAGTAGTATTTATGTGGTATTAGCTACAACAATAATGATAAGTAATA TTTATATGAGTGGACTTAATAAAATAAAAGAGTCTATGTATTATCACAATTATATTTCTGATGAGACATATGATGAAAAG TATGTATCAAATTTTAAGGAAAAAGAAAGTACTGATTTAAAACAGGATAATAAAAAGAATGAAGAAATATCAAATAATAA AAATTTAAACAACAAACAAGATAGAAATATACAAAATAAAGAAAGTAATGAAGAAGGAAGTAATGATATAAAAGAAAAGA ATAATTCTGATAGTAATGTTTCAGTGAATAATAAATCAGAAAAACAAGAAGATAATACAAAAGAAAATAATAAATATACA AGTAAAGAAAAAAATAGTGAAGATATAAAAAAAATAGATATGGAAAGTATAGGAATTTTTAAGAAAGAAATTTATAATAT AGAAAGAGCAGCTTTAGTTCCAATGAGAGAATGCATACCTTACACTAAGGATATAGCAAAAAATATAACTAAATTATCTA GTATAAAAAAAGATGTTACAAATGCCAGAAACAAGTGTAAAGAAGTTGTAAAAGAATATGAAAATATGCAGATTCCAGAA CTTTCTAAGGAGAAGTATACAGAAACATTGAGTAATGCTAGAGATGACGTAAAGAAAGCATATGAGCTTAGAGAAAAATC TATGGAAAGTGCTTTGAAATTAATAAATACTAAAAGCCCTAAATATATAGGGAAGATAACAGAATATCTTGATTTATCAG ATAAGCAGATAGAAAGTTTTAAAAATAGATTGAACGATTTAAAAGAAGAAATAAATAATTCAGAAACAAATAATATTAAT TGA
Upstream 100 bases:
>100_bases ATACAGAATTTAATTTAATAAAAGTTCACGATTAAAAAACATAAATTGGTAAATACTATAAGATACATGATTAAAAATAA ATATTTGAGGGATTTCGGTT
Downstream 100 bases:
>100_bases TAAGATTTAAAGATATAAGTTAAAAGGGAGATTATGATGAATAAACAGAGTATAGGAAAACTAAATATGTTTTTTATGGG GATTACTCAAAGAAACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETYDEK YVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYT SKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN
Sequences:
>Translated_320_residues MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETYDEK YVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYT SKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN >Mature_320_residues MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLNKIKESMYYHNYISDETYDEK YVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNKESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYT SKEKNSEDIKKIDMESIGIFKKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESFKNRLNDLKEEINNSETNNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37762; Mature: 37762
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIKESMYYHNYISDETYDEKYVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCC ESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYTSKEKNSEDIKKIDMESIGIF CCCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH KKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH KNRLNDLKEEINNSETNNIN HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRKETRLMRWILVFIFLYLIPLVVIFRNYKNFKRSCIYSSIYVVLATTIMISNIYMSGLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIKESMYYHNYISDETYDEKYVSNFKEKESTDLKQDNKKNEEISNNKNLNNKQDRNIQNK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHCCCCCC ESNEEGSNDIKEKNNSDSNVSVNNKSEKQEDNTKENNKYTSKEKNSEDIKKIDMESIGIF CCCCCCCHHHHHCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH KKEIYNIERAALVPMRECIPYTKDIAKNITKLSSIKKDVTNARNKCKEVVKEYENMQIPE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSKEKYTETLSNARDDVKKAYELREKSMESALKLINTKSPKYIGKITEYLDLSDKQIESF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH KNRLNDLKEEINNSETNNIN HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA