Click here to switch to the map view.

The map label for this gene is cbiM [H]

Identifier: 126697896

GI number: 126697896

Start: 391385

End: 392137

Strand: Direct

Name: cbiM [H]

Synonym: CD0324

Alternate gene names: 126697896

Gene position: 391385-392137 (Clockwise)

Preceding gene: 126697895

Following gene: 126697897

Centisome position: 9.12

GC content: 32.4

Gene sequence:

>753_bases
ATGAAACAGAATATTAAATTAGGGGTTATAGCTGCACTTATGTTAATCATTTTAACTCCAGTTACATCAAATGCAATGCA
TATAATGGAAGGTTACTTACCAGTAAAATGGTCTATAGCATGGGGAGTTATATTTATACCATTTTTCTTATTCGGATTAA
AATCAATAGGTAAAATAGTAAAGCAAGACCCTAAAAAGAAAGTATTATTAGCTTTATGTGGAGCATTTGTGTTTGTATTA
TCAGCACTAAAAATACCTTCAGTAACAGGAAGTTGTTCACATCCTACTGGTGTAGGTCTTGGAGCAATAATGTTTGGACC
AAGCGTAATGTTTGTTCTTGGAACTATAGTTTTAATATTCCAAGCATTGTTATTAGCACATGGAGGAATAACTACTTTAG
GAGCTAATGCTTTTTCAATGGCGATAATAGGGCCAATCGTATCATTCCTAATATTTAAGGCTTTAAAGAAAAAAGATGGA
AATAATGCTATTCCAGTATTTCTTGCAGCAGCAATAGGAGACTTAGCCACATATACAATAACTTCAATACAATTAGCACT
GGCTTTCCCAGACCCATCAGGTGGGGTAATGGCTTCAGCAATTAAATTTTTAGGAATTTTCTTTATGACTCAAATACCAA
TAGCAATAGCAGAAGGTATACTTACTGTAATTGTATATAATTTAATTACAGAAAACGGAGAAAAAAGCATACTAGAAAAT
AATGATAAAGGAGTTAAAGCTAATGAGTGCTAA

Upstream 100 bases:

>100_bases
TAGAAGCCTAACCATCGAGTTAGGCTTTTTTATTTTATTAAATAAATCAGACATGTATTATTATGTTTTAATTATTAGAA
AGGGAGAGAGGGATACTAAG

Downstream 100 bases:

>100_bases
AACAAAAACAAAAACTAACATATTATTACTTTTATTAGTAGTAGCTCTTATTATATTCCCATTACTTGTCAACTCAGGTG
CTGAATATGGAGGAGCAGAT

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKQNIKLGVIAALMLIILTPVTSNAMHIMEGYLPVKWSIAWGVIFIPFFLFGLKSIGKIVKQDPKKKVLLALCGAFVFVL
SALKIPSVTGSCSHPTGVGLGAIMFGPSVMFVLGTIVLIFQALLLAHGGITTLGANAFSMAIIGPIVSFLIFKALKKKDG
NNAIPVFLAAAIGDLATYTITSIQLALAFPDPSGGVMASAIKFLGIFFMTQIPIAIAEGILTVIVYNLITENGEKSILEN
NDKGVKANEC

Sequences:

>Translated_250_residues
MKQNIKLGVIAALMLIILTPVTSNAMHIMEGYLPVKWSIAWGVIFIPFFLFGLKSIGKIVKQDPKKKVLLALCGAFVFVL
SALKIPSVTGSCSHPTGVGLGAIMFGPSVMFVLGTIVLIFQALLLAHGGITTLGANAFSMAIIGPIVSFLIFKALKKKDG
NNAIPVFLAAAIGDLATYTITSIQLALAFPDPSGGVMASAIKFLGIFFMTQIPIAIAEGILTVIVYNLITENGEKSILEN
NDKGVKANEC
>Mature_250_residues
MKQNIKLGVIAALMLIILTPVTSNAMHIMEGYLPVKWSIAWGVIFIPFFLFGLKSIGKIVKQDPKKKVLLALCGAFVFVL
SALKIPSVTGSCSHPTGVGLGAIMFGPSVMFVLGTIVLIFQALLLAHGGITTLGANAFSMAIIGPIVSFLIFKALKKKDG
NNAIPVFLAAAIGDLATYTITSIQLALAFPDPSGGVMASAIKFLGIFFMTQIPIAIAEGILTVIVYNLITENGEKSILEN
NDKGVKANEC

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 26425; Mature: 26425

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNIKLGVIAALMLIILTPVTSNAMHIMEGYLPVKWSIAWGVIFIPFFLFGLKSIGKIV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
KQDPKKKVLLALCGAFVFVLSALKIPSVTGSCSHPTGVGLGAIMFGPSVMFVLGTIVLIF
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QALLLAHGGITTLGANAFSMAIIGPIVSFLIFKALKKKDGNNAIPVFLAAAIGDLATYTI
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TSIQLALAFPDPSGGVMASAIKFLGIFFMTQIPIAIAEGILTVIVYNLITENGEKSILEN
HHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
NDKGVKANEC
CCCCCCCCCC
>Mature Secondary Structure
MKQNIKLGVIAALMLIILTPVTSNAMHIMEGYLPVKWSIAWGVIFIPFFLFGLKSIGKIV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
KQDPKKKVLLALCGAFVFVLSALKIPSVTGSCSHPTGVGLGAIMFGPSVMFVLGTIVLIF
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QALLLAHGGITTLGANAFSMAIIGPIVSFLIFKALKKKDGNNAIPVFLAAAIGDLATYTI
HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TSIQLALAFPDPSGGVMASAIKFLGIFFMTQIPIAIAEGILTVIVYNLITENGEKSILEN
HHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
NDKGVKANEC
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]