The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yojO [H]

Identifier: 126697895

GI number: 126697895

Start: 389107

End: 390879

Strand: Direct

Name: yojO [H]

Synonym: CD0323

Alternate gene names: 126697895

Gene position: 389107-390879 (Clockwise)

Preceding gene: 126697894

Following gene: 126697896

Centisome position: 9.07

GC content: 27.24

Gene sequence:

>1773_bases
ATGAAATGGATATATGATGATTATGAATTTGAAAATAGAGCTAATAACCTATCATGGACAATAGCTGGTGATTACAATGA
AAGTATAGATATATCAGAAAAAGATTACTCTTCAAAAGAAATAGGTCTATATTTCGCAATAATTGCAGGTGCTAGAAGAA
AGTATGTAGATTGGGATATAGTTAAAAAATATCTTACAAATAGAATAAGAAAAGGATACAACAAAGATGTTATACTAGGT
CTAATTCAAGTTATATTAAATACAATAGTTGAAGAAAAGGTCATTAAAGACAGGCCAGGGATAGAAGACATAAGAAGAAA
TGCTTATAAAGATATTGTTTCACGTTTTACCAAAATACACAATGATAATATTATGGATAAAATTAAATACACATTTGTAC
TTTATAGTATGGACAAGCACCCAGCATTAGATAGTATGACTAGAAGAATAGTTAATGATATAAGAAATATAGATACCAAT
CAAGATATTATGGAGATTTTAAAAGCATTAGATGTTATATATTTAACTTATTTTGAATACATATTAAATGGAGAAGAAAA
TAGTCTTATTGATGAAAATAATGTAGAAAGTGTAGAAGTAAATTTTGATACATTTGCTGATTTCATGTATGAAGAACTTT
ATAGTGATGAAGAAGAAAATATTATTGAAAGTGATATAGATTCAATATCTTCATCCATGCTTGTAGAAGGTGTAGGGGAT
TTTGATGATTCTAAATGTAGCAATTCAGCAGACCGAGTTATATATGTTGATGAAGACACTGCAAATAAGATATATTCAAA
AATAGAACATTATTATGGAAAAACTTATTTGAGTAAAGGTGAAATTAAAAAAATTGAGACACAAAATTGTAGAAATGTTC
ATGAAGGTTGTAGAATACACTTTACAGATGGAGTTCTTAGAAGTGAGTGTAATAATGTATTTCAACTAAAATATGTAACA
AGACAAAAAGAAAATAATTTAGGAAAATTTAGAGAACATGCTAGAATGTATAGACAGCAAATAAAGAGATTAAAAGAAAG
TCTGTCAAGAATTTTAATAGAAGAAAATGCTAAAAGTAGAGTATATTCTGATTGTGGTACTATATTAGCCAATAGAGCTT
GGAGAGTTGGTAGAAGTAATAATAATAAAATATTTTATAAAGATATAGAAAATGAAAAAGGGAAATACGTTATTGATATA
TTATTGGATGCAAGTGGCTCTCAAAGTAGAAATCAGGGAAATGTGGCAATTCAAGCTTACATAATTGCAAATGCTCTAAC
AGAAGTTGGCATACCAAATAGAGTGATGGGATTTTCTAGTTTTTTAGACTATACAATATTAAAAAGATTTAAAGATTATG
ATGATAGTATAAAAAATAGTGAAAATATATTTGAATATTTTTGTGCTGGTAATAATAGAGATGGTTTGGCAATAAAATCT
ATATGTAGTGGTCTAATAAATAGAGATGAAGAAAATAAAATCCTGATAGTTCTCAGCGATGGAAGACCAAATGATGTAAA
GATAGGAAAAAGTAGTGAGAGAACATTAAGAGGAGAAAAGGCTTATAGGGGTATAGTTGGTTTGAGAGATACAGCCAATG
AAGTGAGAAAAGCTAGAAAGCAAAATATATTAGTATTAGGAGTATTTACAGGAAAAGAATCAGAACTTGAAGCTGAAAGA
TTAATATATGGAAATGATTTTATATATTCAAGAGATATAACTAGATTTTCTGATGTAGTTTCAATGTATTTAAAGAAGAT
AATTAGAAATTAA

Upstream 100 bases:

>100_bases
GAGAAAGAAATGGTTGGAGATGTAATTAAAACTAGAATACCTAATAAATGGGAGAGTATAGATGTGTTTCCAATAAGTCA
TATTTAATATAGGTGAGATT

Downstream 100 bases:

>100_bases
TAAACTTACAAAAAAGAATTTATATACATAAAAATATAAAAATGAATAAAATTTATAAAAAATGTAGAAATTTTCACAGA
AAAGGTATACAATGATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLYFAIIAGARRKYVDWDIVKKYLTNRIRKGYNKDVILG
LIQVILNTIVEEKVIKDRPGIEDIRRNAYKDIVSRFTKIHNDNIMDKIKYTFVLYSMDKHPALDSMTRRIVNDIRNIDTN
QDIMEILKALDVIYLTYFEYILNGEENSLIDENNVESVEVNFDTFADFMYEELYSDEEENIIESDIDSISSSMLVEGVGD
FDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTYLSKGEIKKIETQNCRNVHEGCRIHFTDGVLRSECNNVFQLKYVT
RQKENNLGKFREHARMYRQQIKRLKESLSRILIEENAKSRVYSDCGTILANRAWRVGRSNNNKIFYKDIENEKGKYVIDI
LLDASGSQSRNQGNVAIQAYIIANALTEVGIPNRVMGFSSFLDYTILKRFKDYDDSIKNSENIFEYFCAGNNRDGLAIKS
ICSGLINRDEENKILIVLSDGRPNDVKIGKSSERTLRGEKAYRGIVGLRDTANEVRKARKQNILVLGVFTGKESELEAER
LIYGNDFIYSRDITRFSDVVSMYLKKIIRN

Sequences:

>Translated_590_residues
MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLYFAIIAGARRKYVDWDIVKKYLTNRIRKGYNKDVILG
LIQVILNTIVEEKVIKDRPGIEDIRRNAYKDIVSRFTKIHNDNIMDKIKYTFVLYSMDKHPALDSMTRRIVNDIRNIDTN
QDIMEILKALDVIYLTYFEYILNGEENSLIDENNVESVEVNFDTFADFMYEELYSDEEENIIESDIDSISSSMLVEGVGD
FDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTYLSKGEIKKIETQNCRNVHEGCRIHFTDGVLRSECNNVFQLKYVT
RQKENNLGKFREHARMYRQQIKRLKESLSRILIEENAKSRVYSDCGTILANRAWRVGRSNNNKIFYKDIENEKGKYVIDI
LLDASGSQSRNQGNVAIQAYIIANALTEVGIPNRVMGFSSFLDYTILKRFKDYDDSIKNSENIFEYFCAGNNRDGLAIKS
ICSGLINRDEENKILIVLSDGRPNDVKIGKSSERTLRGEKAYRGIVGLRDTANEVRKARKQNILVLGVFTGKESELEAER
LIYGNDFIYSRDITRFSDVVSMYLKKIIRN
>Mature_590_residues
MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLYFAIIAGARRKYVDWDIVKKYLTNRIRKGYNKDVILG
LIQVILNTIVEEKVIKDRPGIEDIRRNAYKDIVSRFTKIHNDNIMDKIKYTFVLYSMDKHPALDSMTRRIVNDIRNIDTN
QDIMEILKALDVIYLTYFEYILNGEENSLIDENNVESVEVNFDTFADFMYEELYSDEEENIIESDIDSISSSMLVEGVGD
FDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTYLSKGEIKKIETQNCRNVHEGCRIHFTDGVLRSECNNVFQLKYVT
RQKENNLGKFREHARMYRQQIKRLKESLSRILIEENAKSRVYSDCGTILANRAWRVGRSNNNKIFYKDIENEKGKYVIDI
LLDASGSQSRNQGNVAIQAYIIANALTEVGIPNRVMGFSSFLDYTILKRFKDYDDSIKNSENIFEYFCAGNNRDGLAIKS
ICSGLINRDEENKILIVLSDGRPNDVKIGKSSERTLRGEKAYRGIVGLRDTANEVRKARKQNILVLGVFTGKESELEAER
LIYGNDFIYSRDITRFSDVVSMYLKKIIRN

Specific function: Unknown

COG id: COG4548

COG function: function code P; Nitric oxide reductase activation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68475; Mature: 68475

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLYFAIIAGARRKYVDWDI
CCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCHHH
VKKYLTNRIRKGYNKDVILGLIQVILNTIVEEKVIKDRPGIEDIRRNAYKDIVSRFTKIH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
NDNIMDKIKYTFVLYSMDKHPALDSMTRRIVNDIRNIDTNQDIMEILKALDVIYLTYFEY
CCCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ILNGEENSLIDENNVESVEVNFDTFADFMYEELYSDEEENIIESDIDSISSSMLVEGVGD
HHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
FDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTYLSKGEIKKIETQNCRNVHEGCRIH
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCHHHCCCCCHHHCCCHHHHHHHCCCEEE
FTDGVLRSECNNVFQLKYVTRQKENNLGKFREHARMYRQQIKRLKESLSRILIEENAKSR
EECCHHHHHCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VYSDCGTILANRAWRVGRSNNNKIFYKDIENEKGKYVIDILLDASGSQSRNQGNVAIQAY
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEEH
IIANALTEVGIPNRVMGFSSFLDYTILKRFKDYDDSIKNSENIFEYFCAGNNRDGLAIKS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHH
ICSGLINRDEENKILIVLSDGRPNDVKIGKSSERTLRGEKAYRGIVGLRDTANEVRKARK
HHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHH
QNILVLGVFTGKESELEAERLIYGNDFIYSRDITRFSDVVSMYLKKIIRN
CCEEEEEEECCCCCCCCHHHEEECCCEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWIYDDYEFENRANNLSWTIAGDYNESIDISEKDYSSKEIGLYFAIIAGARRKYVDWDI
CCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCHHH
VKKYLTNRIRKGYNKDVILGLIQVILNTIVEEKVIKDRPGIEDIRRNAYKDIVSRFTKIH
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
NDNIMDKIKYTFVLYSMDKHPALDSMTRRIVNDIRNIDTNQDIMEILKALDVIYLTYFEY
CCCHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ILNGEENSLIDENNVESVEVNFDTFADFMYEELYSDEEENIIESDIDSISSSMLVEGVGD
HHCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
FDDSKCSNSADRVIYVDEDTANKIYSKIEHYYGKTYLSKGEIKKIETQNCRNVHEGCRIH
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCHHHCCCCCHHHCCCHHHHHHHCCCEEE
FTDGVLRSECNNVFQLKYVTRQKENNLGKFREHARMYRQQIKRLKESLSRILIEENAKSR
EECCHHHHHCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VYSDCGTILANRAWRVGRSNNNKIFYKDIENEKGKYVIDILLDASGSQSRNQGNVAIQAY
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEEH
IIANALTEVGIPNRVMGFSSFLDYTILKRFKDYDDSIKNSENIFEYFCAGNNRDGLAIKS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHH
ICSGLINRDEENKILIVLSDGRPNDVKIGKSSERTLRGEKAYRGIVGLRDTANEVRKARK
HHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHH
QNILVLGVFTGKESELEAERLIYGNDFIYSRDITRFSDVVSMYLKKIIRN
CCEEEEEEECCCCCCCCHHHEEECCCEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]