The gene/protein map for NC_009089 is currently unavailable.
Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is yojN [H]

Identifier: 126697894

GI number: 126697894

Start: 388188

End: 389093

Strand: Direct

Name: yojN [H]

Synonym: CD0322

Alternate gene names: 126697894

Gene position: 388188-389093 (Clockwise)

Preceding gene: 126697887

Following gene: 126697895

Centisome position: 9.05

GC content: 30.24

Gene sequence:

>906_bases
GTGCAAGGGGTAGATGAAAAACTTATTGAAGATGTACTGTATTTTAGAAATTATTATGGATTAGAAAAAGATTTAGAATA
CAGAGTAACAAAGTCTAAAACTTATTTTTATGGTAAAGATATCTTGTCTATGTGTATAGCAGCTATTTTAGAAGAAGAAA
ATATATTATTATCGGGACCAAAGGCAACGGGAAAAAACTTACTTGCTGATAATCTAGGGGAAATATTTAATAGACCTCAG
TGGAATACATCATTTCATATAAATACAGACAGTTCAACACTTATAGGTACAGATACATTTATAGACAATGAAGTTAAACT
TAGAAGAGGCTCAGTTTATGAGTGTGCTATTAATGGAGGTTTTGGGGTATTTGATGAAATTAATATGGCAAAAAATGATG
CTATAGTTGTGGTACATTCAGCTTTAGACTATAGAAGAATAATTGATGTACCTGGGTATGAGAGAGTCAATCTACATCCA
GCAACAAGATTTATTGGGACTATGAATTATGAATATGCAGGAACAAAAGAACTTAATGAAGCACTGGTATCTAGATTTAT
GGTAATAGATATTCCTCCTATAGAAGAAGATAAGTTAATGATGATTTTAAAAAATGAATTTTCAGATGCTGATGAAGAAA
AATTAATACACTTTGCAGGAATATTTTTAGATTTACAATTGAAGTCTCAAAATGGAGAGATATCTAGTAAAGCTATTGAT
TTACGTGGTCTTATGGCATCTCTTAAGACTATAAGAAGAGGATTAAAACCAACTCTTGCAATTAATATGGGACTTACAGG
AAAGACTTTTGATGTATATGAGAAAGAAATGGTTGGAGATGTAATTAAAACTAGAATACCTAATAAATGGGAGAGTATAG
ATGTGTTTCCAATAAGTCATATTTAA

Upstream 100 bases:

>100_bases
TTTAGCTTATATCCTTTTATGCTAAAATGGTGATAAGAAATGAAACAAATACTATTTATATAAAAGGGGTAAAAATATGG
ATATAATAGATAATCTAAGG

Downstream 100 bases:

>100_bases
TATAGGTGAGATTATGAAATGGATATATGATGATTATGAATTTGAAAATAGAGCTAATAACCTATCATGGACAATAGCTG
GTGATTACAATGAAAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYFYGKDILSMCIAAILEEENILLSGPKATGKNLLADNLGEIFNRPQ
WNTSFHINTDSSTLIGTDTFIDNEVKLRRGSVYECAINGGFGVFDEINMAKNDAIVVVHSALDYRRIIDVPGYERVNLHP
ATRFIGTMNYEYAGTKELNEALVSRFMVIDIPPIEEDKLMMILKNEFSDADEEKLIHFAGIFLDLQLKSQNGEISSKAID
LRGLMASLKTIRRGLKPTLAINMGLTGKTFDVYEKEMVGDVIKTRIPNKWESIDVFPISHI

Sequences:

>Translated_301_residues
MQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYFYGKDILSMCIAAILEEENILLSGPKATGKNLLADNLGEIFNRPQ
WNTSFHINTDSSTLIGTDTFIDNEVKLRRGSVYECAINGGFGVFDEINMAKNDAIVVVHSALDYRRIIDVPGYERVNLHP
ATRFIGTMNYEYAGTKELNEALVSRFMVIDIPPIEEDKLMMILKNEFSDADEEKLIHFAGIFLDLQLKSQNGEISSKAID
LRGLMASLKTIRRGLKPTLAINMGLTGKTFDVYEKEMVGDVIKTRIPNKWESIDVFPISHI
>Mature_301_residues
MQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYFYGKDILSMCIAAILEEENILLSGPKATGKNLLADNLGEIFNRPQ
WNTSFHINTDSSTLIGTDTFIDNEVKLRRGSVYECAINGGFGVFDEINMAKNDAIVVVHSALDYRRIIDVPGYERVNLHP
ATRFIGTMNYEYAGTKELNEALVSRFMVIDIPPIEEDKLMMILKNEFSDADEEKLIHFAGIFLDLQLKSQNGEISSKAID
LRGLMASLKTIRRGLKPTLAINMGLTGKTFDVYEKEMVGDVIKTRIPNKWESIDVFPISHI

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011704
- InterPro:   IPR001270 [H]

Pfam domain/function: PF07728 AAA_5 [H]

EC number: NA

Molecular weight: Translated: 34156; Mature: 34156

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYFYGKDILSMCIAAILEEENILLSGP
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECHHHHHHHHHHHHCCCCEEEECC
KATGKNLLADNLGEIFNRPQWNTSFHINTDSSTLIGTDTFIDNEVKLRRGSVYECAINGG
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCEECCCEEEECCCEEEEEECCC
FGVFDEINMAKNDAIVVVHSALDYRRIIDVPGYERVNLHPATRFIGTMNYEYAGTKELNE
CCCCCCCCCCCCCEEEEEECCCCCHHEECCCCCCEEECCHHHHHHCCCCCCCCCHHHHHH
ALVSRFMVIDIPPIEEDKLMMILKNEFSDADEEKLIHFAGIFLDLQLKSQNGEISSKAID
HHHHCEEEEECCCCCCCCEEEEEECCCCCCCHHHHEEEEEEEEEEEEECCCCCCCHHHHH
LRGLMASLKTIRRGLKPTLAINMGLTGKTFDVYEKEMVGDVIKTRIPNKWESIDVFPISH
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
I
C
>Mature Secondary Structure
MQGVDEKLIEDVLYFRNYYGLEKDLEYRVTKSKTYFYGKDILSMCIAAILEEENILLSGP
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECHHHHHHHHHHHHCCCCEEEECC
KATGKNLLADNLGEIFNRPQWNTSFHINTDSSTLIGTDTFIDNEVKLRRGSVYECAINGG
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCEECCCEEEECCCEEEEEECCC
FGVFDEINMAKNDAIVVVHSALDYRRIIDVPGYERVNLHPATRFIGTMNYEYAGTKELNE
CCCCCCCCCCCCCEEEEEECCCCCHHEECCCCCCEEECCHHHHHHCCCCCCCCCHHHHHH
ALVSRFMVIDIPPIEEDKLMMILKNEFSDADEEKLIHFAGIFLDLQLKSQNGEISSKAID
HHHHCEEEEECCCCCCCCEEEEEECCCCCCCHHHHEEEEEEEEEEEEECCCCCCCHHHHH
LRGLMASLKTIRRGLKPTLAINMGLTGKTFDVYEKEMVGDVIKTRIPNKWESIDVFPISH
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]