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The map label for this gene is yngC [H]

Identifier: 126697886

GI number: 126697886

Start: 382386

End: 382994

Strand: Direct

Name: yngC [H]

Synonym: CD0314

Alternate gene names: 126697886

Gene position: 382386-382994 (Clockwise)

Preceding gene: 126697885

Following gene: 126697887

Centisome position: 8.91

GC content: 26.77

Gene sequence:

>609_bases
GTGTCTGTAATCAATAGTTTTATTTTACAATATGGATTAATCTCTGTATTTGTATTAATTATGATTGAGTATGCTTGTTT
TCCATTACCTAGCGAAGTTGTTTTACCTTTATGTGGAGCAATTGCTGCAAGAAATCATTTTGGATTTCTGACAATTTTAA
TTTTAAGTATAATTGCAGGTATACTTGGTTCGATATTTTGTTATACAGTGGGAAATTGGGGAGGTAAATCTATCATAAAT
AAAATAATAGAGATATGTCCAAAGGCAAAGAAAGGAATATTTGCATCTCAAGATTATTTTAATAAATACTCTTCTATTTC
TGTTTGTGTATGTAGATTAATCCCTTTATGTAGAACATACATATCTTTTATAGCAGGTATAGCAGGTCAAAATATTATAA
CTTTTGTAATATCATCTATCGTGGGAATAACCATATGGAATACTTCATTAATCAGTATAGGATATATTTTTTCTGAGAGT
TGGGTAAGAATAATGTCACATTATAATGATTATAAATTCCTCGTTCTAATTATACCAATATCCATAATTTTTATTGGATT
TGTTATTAAGTCATTTATACATAAAAAACATCACAAGATAAGATTATAA

Upstream 100 bases:

>100_bases
ATATAATAGTTTAAAGAGATTGATTCTTTAAATATAGGGTGAGAATCCTTAGAATATGTACCCTTAAAACCTTTAAATAA
GAAAGGAGATAGATAAGTAA

Downstream 100 bases:

>100_bases
AAAATATTAGAAAAATTTCTTTTGTACAAGGTCATTAAGACGGTTGAGAAAATAGAAGGCGTCGTAAATCTGCATAAGCA
CTACGTTTTTGTAGGTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAARNHFGFLTILILSIIAGILGSIFCYTVGNWGGKSIIN
KIIEICPKAKKGIFASQDYFNKYSSISVCVCRLIPLCRTYISFIAGIAGQNIITFVISSIVGITIWNTSLISIGYIFSES
WVRIMSHYNDYKFLVLIIPISIIFIGFVIKSFIHKKHHKIRL

Sequences:

>Translated_202_residues
MSVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAARNHFGFLTILILSIIAGILGSIFCYTVGNWGGKSIIN
KIIEICPKAKKGIFASQDYFNKYSSISVCVCRLIPLCRTYISFIAGIAGQNIITFVISSIVGITIWNTSLISIGYIFSES
WVRIMSHYNDYKFLVLIIPISIIFIGFVIKSFIHKKHHKIRL
>Mature_201_residues
SVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAARNHFGFLTILILSIIAGILGSIFCYTVGNWGGKSIINK
IIEICPKAKKGIFASQDYFNKYSSISVCVCRLIPLCRTYISFIAGIAGQNIITFVISSIVGITIWNTSLISIGYIFSESW
VRIMSHYNDYKFLVLIIPISIIFIGFVIKSFIHKKHHKIRL

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22598; Mature: 22466

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAARNHFGFLTILILSIIAG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ILGSIFCYTVGNWGGKSIINKIIEICPKAKKGIFASQDYFNKYSSISVCVCRLIPLCRTY
HHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ISFIAGIAGQNIITFVISSIVGITIWNTSLISIGYIFSESWVRIMSHYNDYKFLVLIIPI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SIIFIGFVIKSFIHKKHHKIRL
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVINSFILQYGLISVFVLIMIEYACFPLPSEVVLPLCGAIAARNHFGFLTILILSIIAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ILGSIFCYTVGNWGGKSIINKIIEICPKAKKGIFASQDYFNKYSSISVCVCRLIPLCRTY
HHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ISFIAGIAGQNIITFVISSIVGITIWNTSLISIGYIFSESWVRIMSHYNDYKFLVLIIPI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SIIFIGFVIKSFIHKKHHKIRL
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]