| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is manX [H]
Identifier: 126697856
GI number: 126697856
Start: 346714
End: 347118
Strand: Direct
Name: manX [H]
Synonym: CD0284
Alternate gene names: 126697856
Gene position: 346714-347118 (Clockwise)
Preceding gene: 126697855
Following gene: 126697857
Centisome position: 8.08
GC content: 32.1
Gene sequence:
>405_bases GTGATAGGAATAATAGTTATGACTCATGGGAGTTTTAGTGAAGAAATTATAAAAAGCTGTGAACTTATTGCAGGACCAGC AGAAAGAACAGCAGCAATTAAACTAAATAGGAATGATAATATTGAAGACTTAAATAAAAATTTTGTAGAAAAGTTAAATG AATTAGATGAAGGTGACGGAGTTTTAGTATTAGCTGACCTATTAGGAGGTTCGCCAAGTAATGTTGCAAGTTTAAACCTT AAAAAAGGTGGCAAGTTTCATGCACTTACTGGAGTAAATCTTCCAATGCTACTTGAAGCTTTAATTAATAGAGAGGGAAA AAGTTTAGAAGAGTTAGCAGAAGCATGTATTGAAGCAGGACAAACTGGTATAAACAATATTAATAAAGTTCTTAGCTCAA TGTAA
Upstream 100 bases:
>100_bases TTTGATTAAATCCTGTAAAATAGCCATTTGTTATTGATACACATAAGTTGGCACGGCAATTGCTTATATAAAAAGTGACA AGAAAAGTGAGGTGAAATTG
Downstream 100 bases:
>100_bases TAGAAAAAGGAGTTTGATTAAAAATGTCTTTAGTAAAATATTGCAGATGTGATGATAGATTAATACATGGTCAAGTTATA TATAAATGGGTTAAGCATCT
Product: PTS system transporter subunit IIA
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNL KKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM
Sequences:
>Translated_134_residues MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNL KKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM >Mature_134_residues MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNL KKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=124, Percent_Identity=35.4838709677419, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI1786321, Length=127, Percent_Identity=27.5590551181102, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 14287; Mature: 14287
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDG CEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC VLVLADLLGGSPSNVASLNLKKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAG EEEEHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC QTGINNINKVLSSM CCCHHHHHHHHHCC >Mature Secondary Structure MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDG CEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC VLVLADLLGGSPSNVASLNLKKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAG EEEEHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC QTGINNINKVLSSM CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]