Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is manX [H]

Identifier: 126697856

GI number: 126697856

Start: 346714

End: 347118

Strand: Direct

Name: manX [H]

Synonym: CD0284

Alternate gene names: 126697856

Gene position: 346714-347118 (Clockwise)

Preceding gene: 126697855

Following gene: 126697857

Centisome position: 8.08

GC content: 32.1

Gene sequence:

>405_bases
GTGATAGGAATAATAGTTATGACTCATGGGAGTTTTAGTGAAGAAATTATAAAAAGCTGTGAACTTATTGCAGGACCAGC
AGAAAGAACAGCAGCAATTAAACTAAATAGGAATGATAATATTGAAGACTTAAATAAAAATTTTGTAGAAAAGTTAAATG
AATTAGATGAAGGTGACGGAGTTTTAGTATTAGCTGACCTATTAGGAGGTTCGCCAAGTAATGTTGCAAGTTTAAACCTT
AAAAAAGGTGGCAAGTTTCATGCACTTACTGGAGTAAATCTTCCAATGCTACTTGAAGCTTTAATTAATAGAGAGGGAAA
AAGTTTAGAAGAGTTAGCAGAAGCATGTATTGAAGCAGGACAAACTGGTATAAACAATATTAATAAAGTTCTTAGCTCAA
TGTAA

Upstream 100 bases:

>100_bases
TTTGATTAAATCCTGTAAAATAGCCATTTGTTATTGATACACATAAGTTGGCACGGCAATTGCTTATATAAAAAGTGACA
AGAAAAGTGAGGTGAAATTG

Downstream 100 bases:

>100_bases
TAGAAAAAGGAGTTTGATTAAAAATGTCTTTAGTAAAATATTGCAGATGTGATGATAGATTAATACATGGTCAAGTTATA
TATAAATGGGTTAAGCATCT

Product: PTS system transporter subunit IIA

Products: NA

Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNL
KKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM

Sequences:

>Translated_134_residues
MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNL
KKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM
>Mature_134_residues
MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDGVLVLADLLGGSPSNVASLNL
KKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAGQTGINNINKVLSSM

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG2893

COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788120, Length=124, Percent_Identity=35.4838709677419, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1786321, Length=127, Percent_Identity=27.5590551181102, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004701
- InterPro:   IPR013789
- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 14287; Mature: 14287

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS51096 PTS_EIIA_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDG
CEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
VLVLADLLGGSPSNVASLNLKKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAG
EEEEHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC
QTGINNINKVLSSM
CCCHHHHHHHHHCC
>Mature Secondary Structure
MIGIIVMTHGSFSEEIIKSCELIAGPAERTAAIKLNRNDNIEDLNKNFVEKLNELDEGDG
CEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
VLVLADLLGGSPSNVASLNLKKGGKFHALTGVNLPMLLEALINREGKSLEELAEACIEAG
EEEEHHHHCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC
QTGINNINKVLSSM
CCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]