| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is dhaT [H]
Identifier: 126697846
GI number: 126697846
Start: 335742
End: 336872
Strand: Direct
Name: dhaT [H]
Synonym: CD0274
Alternate gene names: 126697846
Gene position: 335742-336872 (Clockwise)
Preceding gene: 126697845
Following gene: 126697847
Centisome position: 7.83
GC content: 30.77
Gene sequence:
>1131_bases ATGAATTTTAATTATAATTTGCCAGTAAATATCTTATTTGGGAGAGGCAGAATTAATGATGTGGGAAAAGAAGTATCTAA ATATGGCAAAAAAGTATTGATAGTAACAGGTAAAAATAGTACAAAGAAAACTGGATTACTTGATAAAACAATAGATTTAC TAAAAGACTCTAAAATAGAATATGAAGTTTTTGATAGAGTAGAACAAAATCCTCTTATAACTACTATATATTCAGGAGTA GAAATTATAAAATCAACTGGATGTGATTGTGTTTTAGGGCTTGGTGGTGGAAGCATTATGGATGCTGCCAAGAGTATAGC TTTTTCTTATAAAAACCCAGGAGATTTAAATGATTATATATTTGGAATTAGACAAGGTGAAGAAGCTTTACCTATAATCT TAGTTCCAACAACATCAGGTACAGGTAGTGAAGGAAATTGTTTTGCAGTACTTACAAATTCAGAAACTAAAGATAAAAAA TCTATAAAGAAGAATAGTATGTATGCAAAAGCATCAATAATTGACCCAGAACTTATGGTTACAATGCCAAAACATATAAT TGCATCAGTTGGATTTGATGCACTTGCCCATAATATGGAAGCATATCTTTCTAATGGAAGAAACCCTCTTGCAGATGTAC AAGCTATTTATGGGATTGAACTTATATCAGAAAACCTAATAAAGGTATATAATGATGTTAATGATTTAGAAGCATGGGAA AAAATAACACTTGCAAGTACTATTGGAGGAATGACGATTGGTACAGCGGGTACAGCCTTGCCACATGGAATGGAGCATCC TGTAAGTGGTCTTAGAGATGTAATGCATGGAAAAGGACTTGCAGCTTTGACTCCTACTATTATAGAAAGTTCATGGGATA GTGATATTGAAAGATTTGGTAATATTTCAAAGGTATTAGGAGGAACTTGTGCAGAAGATTGTTCAGATGCAATTAGAAAT TTCCTTAAAAAAATAGATTTAGATATAAAACTAAGTGATTTAGGTATTGAAAAATCAGATATAGATTGGTTAACTGATAA TTGTATGAAAATATCAGTTGCAAATATTAAGAGACATCCAAAGTATTTTAATAAGGAACAAATAAAGGAAATGTACCATA AGTCTTTATAA
Upstream 100 bases:
>100_bases AATTAAGTAAAAGATTGTTTTTTAGTTTATGTTTAAATACATAATTACACTTTGTTAAAAACATAAAATTATTACTAAAG TAGAAATAGGAGGTTTTAGA
Downstream 100 bases:
>100_bases TTTGACTTTACATATTTAGTTTTATATAAAAATTATAAATTAATAATAAAAAATTATAAGTAATTAATAGTAAAAAAATT GTGTATAGAAGTTATATATA
Product: 1,3-propanediol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKTGLLDKTIDLLKDSKIEYEVFDRVEQNPLITTIYSGV EIIKSTGCDCVLGLGGGSIMDAAKSIAFSYKNPGDLNDYIFGIRQGEEALPIILVPTTSGTGSEGNCFAVLTNSETKDKK SIKKNSMYAKASIIDPELMVTMPKHIIASVGFDALAHNMEAYLSNGRNPLADVQAIYGIELISENLIKVYNDVNDLEAWE KITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMHGKGLAALTPTIIESSWDSDIERFGNISKVLGGTCAEDCSDAIRN FLKKIDLDIKLSDLGIEKSDIDWLTDNCMKISVANIKRHPKYFNKEQIKEMYHKSL
Sequences:
>Translated_376_residues MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKTGLLDKTIDLLKDSKIEYEVFDRVEQNPLITTIYSGV EIIKSTGCDCVLGLGGGSIMDAAKSIAFSYKNPGDLNDYIFGIRQGEEALPIILVPTTSGTGSEGNCFAVLTNSETKDKK SIKKNSMYAKASIIDPELMVTMPKHIIASVGFDALAHNMEAYLSNGRNPLADVQAIYGIELISENLIKVYNDVNDLEAWE KITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMHGKGLAALTPTIIESSWDSDIERFGNISKVLGGTCAEDCSDAIRN FLKKIDLDIKLSDLGIEKSDIDWLTDNCMKISVANIKRHPKYFNKEQIKEMYHKSL >Mature_376_residues MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKTGLLDKTIDLLKDSKIEYEVFDRVEQNPLITTIYSGV EIIKSTGCDCVLGLGGGSIMDAAKSIAFSYKNPGDLNDYIFGIRQGEEALPIILVPTTSGTGSEGNCFAVLTNSETKDKK SIKKNSMYAKASIIDPELMVTMPKHIIASVGFDALAHNMEAYLSNGRNPLADVQAIYGIELISENLIKVYNDVNDLEAWE KITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMHGKGLAALTPTIIESSWDSDIERFGNISKVLGGTCAEDCSDAIRN FLKKIDLDIKLSDLGIEKSDIDWLTDNCMKISVANIKRHPKYFNKEQIKEMYHKSL
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=382, Percent_Identity=29.0575916230367, Blast_Score=135, Evalue=4e-32, Organism=Escherichia coli, GI48994951, Length=381, Percent_Identity=29.6587926509186, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI87082107, Length=376, Percent_Identity=28.4574468085106, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789163, Length=374, Percent_Identity=28.8770053475936, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1787493, Length=363, Percent_Identity=30.5785123966942, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1789386, Length=359, Percent_Identity=27.2980501392758, Blast_Score=129, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17537053, Length=414, Percent_Identity=28.5024154589372, Blast_Score=156, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321181, Length=378, Percent_Identity=29.6296296296296, Blast_Score=175, Evalue=1e-44, Organism=Drosophila melanogaster, GI24657991, Length=424, Percent_Identity=27.5943396226415, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 41167; Mature: 41167
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKTGLLDKTIDLLKDSKIE CCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCC YEVFDRVEQNPLITTIYSGVEIIKSTGCDCVLGLGGGSIMDAAKSIAFSYKNPGDLNDYI HHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHEECCCCCCCCCHHH FGIRQGEEALPIILVPTTSGTGSEGNCFAVLTNSETKDKKSIKKNSMYAKASIIDPELMV EEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCHHHH TMPKHIIASVGFDALAHNMEAYLSNGRNPLADVQAIYGIELISENLIKVYNDVNDLEAWE HHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMHGKGLAALTPTIIESSWDSDIERFG HHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHC NISKVLGGTCAEDCSDAIRNFLKKIDLDIKLSDLGIEKSDIDWLTDNCMKISVANIKRHP CHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHCCCCEEEEEHHHHHCC KYFNKEQIKEMYHKSL CCCCHHHHHHHHHHCC >Mature Secondary Structure MNFNYNLPVNILFGRGRINDVGKEVSKYGKKVLIVTGKNSTKKTGLLDKTIDLLKDSKIE CCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCC YEVFDRVEQNPLITTIYSGVEIIKSTGCDCVLGLGGGSIMDAAKSIAFSYKNPGDLNDYI HHHHHHHCCCCCEEEHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHEECCCCCCCCCHHH FGIRQGEEALPIILVPTTSGTGSEGNCFAVLTNSETKDKKSIKKNSMYAKASIIDPELMV EEEECCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCHHHH TMPKHIIASVGFDALAHNMEAYLSNGRNPLADVQAIYGIELISENLIKVYNDVNDLEAWE HHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KITLASTIGGMTIGTAGTALPHGMEHPVSGLRDVMHGKGLAALTPTIIESSWDSDIERFG HHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHC NISKVLGGTCAEDCSDAIRNFLKKIDLDIKLSDLGIEKSDIDWLTDNCMKISVANIKRHP CHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHCCCCEEEEEHHHHHCC KYFNKEQIKEMYHKSL CCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]