Click here to switch to the map view.

The map label for this gene is flgD [C]

Identifier: 126697825

GI number: 126697825

Start: 316762

End: 317370

Strand: Direct

Name: flgD [C]

Synonym: CD0254

Alternate gene names: 126697825

Gene position: 316762-317370 (Clockwise)

Preceding gene: 126697824

Following gene: 126697826

Centisome position: 7.38

GC content: 35.47

Gene sequence:

>609_bases
ATGTACGGAATAGCAACGGCTTTGGCAGGAACTCAGGGAAACTATAGGTCAAATAACTTAAGCCAACTTGAAAGAAATAT
TAATGATATTGCCAATAAACAAGTTAGAAGCAAAGGAAATCAGACAGTAACAGACAATGGGACTCCAATTATAGGACAAG
GTGATGATGCTGATAAAGACTTGTTTATGAAGATACTTGTGGCACAGATGGGTAATCAAGACCCAATGAATCCGCAAGAC
CCAACAGAATATGTGTCACAATTAGCACAGTTTGCAACTTTAGAAAAGATGTCAGCTATGAATGAGAAGCTAGATGTACT
TTTAGCCTTAAGTAATTCCACTCTAATAAACTCTGCTTTGAGTATGGCAACATCATTAATTGGTAAAGAAGTAGAAGTAT
CTGGGGAAGAGAAAGAAGATGAAAACATTGTAGGAGTAGTAAAGTCCACATATATAAAAGATGGGGAAGTACACTTAGAA
TTAGAAGTAGATGGAAGTGACAAAACTGTAGGTGTTAAATATGAAAAATTACTTAAAATAGGAGAGGTAGATGAAAATTC
AGGAGAAGAAAATGACTCTTCAGAACAAGAATCTCCAGAAGAAGCATAA

Upstream 100 bases:

>100_bases
ATGATAAGCATAATAATGTAGTCATAGAAGATGACATTAAAGAAAATATTATTGATGATGATAGAGTAGATTTACTAGCT
TAGTAAGGGGGAAGTATTGC

Downstream 100 bases:

>100_bases
TATTAAATGAGAAAAGAGGTAAATTCATGATAAAAGCAATGTATTCAGGTGTAAGTGGAATGAAAGCAAATCAAACAAAA
TTAGATGTAATAGGTAACAA

Product: basal-body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Assembly Protein FlgD; Basal-Body Rod Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MYGIATALAGTQGNYRSNNLSQLERNINDIANKQVRSKGNQTVTDNGTPIIGQGDDADKDLFMKILVAQMGNQDPMNPQD
PTEYVSQLAQFATLEKMSAMNEKLDVLLALSNSTLINSALSMATSLIGKEVEVSGEEKEDENIVGVVKSTYIKDGEVHLE
LEVDGSDKTVGVKYEKLLKIGEVDENSGEENDSSEQESPEEA

Sequences:

>Translated_202_residues
MYGIATALAGTQGNYRSNNLSQLERNINDIANKQVRSKGNQTVTDNGTPIIGQGDDADKDLFMKILVAQMGNQDPMNPQD
PTEYVSQLAQFATLEKMSAMNEKLDVLLALSNSTLINSALSMATSLIGKEVEVSGEEKEDENIVGVVKSTYIKDGEVHLE
LEVDGSDKTVGVKYEKLLKIGEVDENSGEENDSSEQESPEEA
>Mature_202_residues
MYGIATALAGTQGNYRSNNLSQLERNINDIANKQVRSKGNQTVTDNGTPIIGQGDDADKDLFMKILVAQMGNQDPMNPQD
PTEYVSQLAQFATLEKMSAMNEKLDVLLALSNSTLINSALSMATSLIGKEVEVSGEEKEDENIVGVVKSTYIKDGEVHLE
LEVDGSDKTVGVKYEKLLKIGEVDENSGEENDSSEQESPEEA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21932; Mature: 21932

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGIATALAGTQGNYRSNNLSQLERNINDIANKQVRSKGNQTVTDNGTPIIGQGDDADKD
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCHH
LFMKILVAQMGNQDPMNPQDPTEYVSQLAQFATLEKMSAMNEKLDVLLALSNSTLINSAL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH
SMATSLIGKEVEVSGEEKEDENIVGVVKSTYIKDGEVHLELEVDGSDKTVGVKYEKLLKI
HHHHHHHCCCEECCCCCCCCCHHHHHHHHHEECCCEEEEEEEECCCCCEECHHHHHHHHH
GEVDENSGEENDSSEQESPEEA
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYGIATALAGTQGNYRSNNLSQLERNINDIANKQVRSKGNQTVTDNGTPIIGQGDDADKD
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEECCCCCCCHH
LFMKILVAQMGNQDPMNPQDPTEYVSQLAQFATLEKMSAMNEKLDVLLALSNSTLINSAL
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHH
SMATSLIGKEVEVSGEEKEDENIVGVVKSTYIKDGEVHLELEVDGSDKTVGVKYEKLLKI
HHHHHHHCCCEECCCCCCCCCHHHHHHHHHEECCCEEEEEEEECCCCCEECHHHHHHHHH
GEVDENSGEENDSSEQESPEEA
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA