| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is fliS2
Identifier: 126697807
GI number: 126697807
Start: 298599
End: 298952
Strand: Direct
Name: fliS2
Synonym: CD0236
Alternate gene names: NA
Gene position: 298599-298952 (Clockwise)
Preceding gene: 126697806
Following gene: 126697808
Centisome position: 6.96
GC content: 25.99
Gene sequence:
>354_bases ATGATGGAGTTAGATTTAAATGAACTAAATGGGTTATCAAAAGAAGAATTACTATTAATGCTTGTAGATGGTACAGTCAA GTATACTAATATATCTAAAGTTGCACTTTTAAATAAAGACTATTTAAAAGCACACAATGAACTTGTTAGAGTTCAAAATA TATTTACAGAATTAATGGTCACATTAGACCAAAGTGTAGGACAATGGGCAAAGGATATGTATAAAGTTTATGAATTCATA AAACATGAATTAGTAAAGGCTGATATAAATAAAGATATTAAAATAATTGATGATATATTGCCAATAGTAGAACAAATAAG AGATACATGGCATGAAGTGTATAATAAACTATAA
Upstream 100 bases:
>100_bases ATGTACAAATAATAGATAATGTATTACCTGTAATAGAAGAAATTAAAGATACATGGCATGAGGCTGATAGAAAAAGTAGA GAAGAAAGAAGTAGGTATAA
Downstream 100 bases:
>100_bases CTATAATCATGATGGGGGGATAAACATATGTCAAGTATAAGTCCAGTAAGAGTTACAGGCCTTTCAGGAAATTTTGATAT GGAAGGTATAATAGAAGCTA
Product: flagellar protein
Products: NA
Alternate protein names: Flagellar Protein; Flagellar Protein Flis
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MMELDLNELNGLSKEELLLMLVDGTVKYTNISKVALLNKDYLKAHNELVRVQNIFTELMVTLDQSVGQWAKDMYKVYEFI KHELVKADINKDIKIIDDILPIVEQIRDTWHEVYNKL
Sequences:
>Translated_117_residues MMELDLNELNGLSKEELLLMLVDGTVKYTNISKVALLNKDYLKAHNELVRVQNIFTELMVTLDQSVGQWAKDMYKVYEFI KHELVKADINKDIKIIDDILPIVEQIRDTWHEVYNKL >Mature_117_residues MMELDLNELNGLSKEELLLMLVDGTVKYTNISKVALLNKDYLKAHNELVRVQNIFTELMVTLDQSVGQWAKDMYKVYEFI KHELVKADINKDIKIIDDILPIVEQIRDTWHEVYNKL
Specific function: Unknown
COG id: COG1516
COG function: function code NUO; Flagellin-specific chaperone FliS
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13751; Mature: 13751
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMELDLNELNGLSKEELLLMLVDGTVKYTNISKVALLNKDYLKAHNELVRVQNIFTELMV CCCCCCHHHCCCCHHHEEEHEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLDQSVGQWAKDMYKVYEFIKHELVKADINKDIKIIDDILPIVEQIRDTWHEVYNKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMELDLNELNGLSKEELLLMLVDGTVKYTNISKVALLNKDYLKAHNELVRVQNIFTELMV CCCCCCHHHCCCCHHHEEEHEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLDQSVGQWAKDMYKVYEFIKHELVKADINKDIKIIDDILPIVEQIRDTWHEVYNKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA