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The map label for this gene is yjbJ [H]

Identifier: 126697797

GI number: 126697797

Start: 293002

End: 293670

Strand: Direct

Name: yjbJ [H]

Synonym: CD0226

Alternate gene names: 126697797

Gene position: 293002-293670 (Clockwise)

Preceding gene: 126697796

Following gene: 126697798

Centisome position: 6.83

GC content: 31.24

Gene sequence:

>669_bases
TTGAACGAAATAAGTTCACTAATAAATATACTGGCATTGACCCAATTATCTGGTAGTAATACCACAAATCAATGCAACTG
TGGATATAATAATTCATCTGGATTTGATATGATTATGATGACATTGTTGAAAGCATTATCACAAAATAATCAACAAACCT
CTAATGGATATAATTTATCATCTAATTCTGAAAAACTGTTTAATGAACTTGATAGTGTAGCAAATAATACAGTTGGTAAG
TTTATTGAAGTTGATACAAAAGATAAAAGTGTAAAGTCGAGAATTGAAAATGCTGTAGAGCAAGCATCAAAGAAATATAA
TGTAGATGCAAATCTTATAAAGGCAATAATTAAGGTTGAATCAGATTTTAACCCAAATACTGTATCTTCTGCTGGTGCCA
AGGGTCTTATGCAACTTATGCCAGAAAATTGCAGAGATTTGGGAGTAACAAACCCTTTTAACATAGAACAAAATATAGAT
GCTGGTACTAGACATATTAAGGAATATATAGATATGTTTGGAGGTAGCATAGAAATGGGATTGATGGCATATAATGGTGG
ACCTGGTAGAATGAGAAGTAGAGGCGTAGAATCAATTTCTGACTTGTATAAAATGCCAAAGGAGACACAAAATTATATAC
CTAAAGTTATGAAATATTATAGAGGGTAG

Upstream 100 bases:

>100_bases
AAAGTAGTCTATAACAAGAAGATTTTATAGGAACTCAAGTATCTTGAATTATATAAGGATAACTTTAAAGTTTATAAAAT
TTAGAAAGGGGAGTTTTATT

Downstream 100 bases:

>100_bases
GATTTACTATGGGTATAAATATAGACAAGCTAAATATAAGTCCAAGTAGAAGTATAGAAGTTAAAAAGACAAAGGAAAAT
AATAAGTTTTCTGACAGCTT

Product: transglycosylase

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNEISSLINILALTQLSGSNTTNQCNCGYNNSSGFDMIMMTLLKALSQNNQQTSNGYNLSSNSEKLFNELDSVANNTVGK
FIEVDTKDKSVKSRIENAVEQASKKYNVDANLIKAIIKVESDFNPNTVSSAGAKGLMQLMPENCRDLGVTNPFNIEQNID
AGTRHIKEYIDMFGGSIEMGLMAYNGGPGRMRSRGVESISDLYKMPKETQNYIPKVMKYYRG

Sequences:

>Translated_222_residues
MNEISSLINILALTQLSGSNTTNQCNCGYNNSSGFDMIMMTLLKALSQNNQQTSNGYNLSSNSEKLFNELDSVANNTVGK
FIEVDTKDKSVKSRIENAVEQASKKYNVDANLIKAIIKVESDFNPNTVSSAGAKGLMQLMPENCRDLGVTNPFNIEQNID
AGTRHIKEYIDMFGGSIEMGLMAYNGGPGRMRSRGVESISDLYKMPKETQNYIPKVMKYYRG
>Mature_222_residues
MNEISSLINILALTQLSGSNTTNQCNCGYNNSSGFDMIMMTLLKALSQNNQQTSNGYNLSSNSEKLFNELDSVANNTVGK
FIEVDTKDKSVKSRIENAVEQASKKYNVDANLIKAIIKVESDFNPNTVSSAGAKGLMQLMPENCRDLGVTNPFNIEQNID
AGTRHIKEYIDMFGGSIEMGLMAYNGGPGRMRSRGVESISDLYKMPKETQNYIPKVMKYYRG

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 24558; Mature: 24558

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEISSLINILALTQLSGSNTTNQCNCGYNNSSGFDMIMMTLLKALSQNNQQTSNGYNLS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SNSEKLFNELDSVANNTVGKFIEVDTKDKSVKSRIENAVEQASKKYNVDANLIKAIIKVE
CCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SDFNPNTVSSAGAKGLMQLMPENCRDLGVTNPFNIEQNIDAGTRHIKEYIDMFGGSIEMG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
LMAYNGGPGRMRSRGVESISDLYKMPKETQNYIPKVMKYYRG
EEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEISSLINILALTQLSGSNTTNQCNCGYNNSSGFDMIMMTLLKALSQNNQQTSNGYNLS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SNSEKLFNELDSVANNTVGKFIEVDTKDKSVKSRIENAVEQASKKYNVDANLIKAIIKVE
CCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SDFNPNTVSSAGAKGLMQLMPENCRDLGVTNPFNIEQNIDAGTRHIKEYIDMFGGSIEMG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
LMAYNGGPGRMRSRGVESISDLYKMPKETQNYIPKVMKYYRG
EEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]