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The map label for this gene is tnpA1 [H]

Identifier: 126697786

GI number: 126697786

Start: 278948

End: 279346

Strand: Direct

Name: tnpA1 [H]

Synonym: CD0215

Alternate gene names: 126697786

Gene position: 278948-279346 (Clockwise)

Preceding gene: 126697783

Following gene: 126697787

Centisome position: 6.5

GC content: 30.08

Gene sequence:

>399_bases
ATGTATAAATCTAACAAAAATATAGTTTATGATTGCAAATATCATATTGTATTTTGCCCTAAGTATCGTAAACCTGTTTT
AGTTGGCGAAGTTGAAAAGATGTTAAAAGAAATACTACCATATAAAGCAGATGAACTTGGAGCAGAAATAATAGAAATGG
AAACTGATAAAGAACATGTGCACTTATTAATATCTTGTGACCCTCAATATGGAATTCATAAAGTAGTAAAAGGTTTAAAA
GGCTTTAGTTCGAGAGTATTAAGAGAGAACTTTCCACATTTAAAGTCTAGTATGCCTAGCATGTGGACTAATAGCTATTT
TGTAGGTACTGTTGGTTCTGTGAGTTTAGAAGTAGTTAAACAATATATAGAAAATCAACAAGTTAGGACAAAGAAATGA

Upstream 100 bases:

>100_bases
GTAGGGATGAAAGGTAAGGTCTTAATATAAAAAAAGTTAGAATAATGCTTGTAATCTAATACCGCTACTGATACCCTATA
TTTAGGAGGTGTTAGTTTTT

Downstream 100 bases:

>100_bases
TAAAAACTCATAGAGTGAAATTAAACCTAACTAGAACACAATTTGAATTAGTAAGGGAAAAGCAAATGGAAAGTGCTAAC
TGTTGGAACTACATAGTTAA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MYKSNKNIVYDCKYHIVFCPKYRKPVLVGEVEKMLKEILPYKADELGAEIIEMETDKEHVHLLISCDPQYGIHKVVKGLK
GFSSRVLRENFPHLKSSMPSMWTNSYFVGTVGSVSLEVVKQYIENQQVRTKK

Sequences:

>Translated_132_residues
MYKSNKNIVYDCKYHIVFCPKYRKPVLVGEVEKMLKEILPYKADELGAEIIEMETDKEHVHLLISCDPQYGIHKVVKGLK
GFSSRVLRENFPHLKSSMPSMWTNSYFVGTVGSVSLEVVKQYIENQQVRTKK
>Mature_132_residues
MYKSNKNIVYDCKYHIVFCPKYRKPVLVGEVEKMLKEILPYKADELGAEIIEMETDKEHVHLLISCDPQYGIHKVVKGLK
GFSSRVLRENFPHLKSSMPSMWTNSYFVGTVGSVSLEVVKQYIENQQVRTKK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 15312; Mature: 15312

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKSNKNIVYDCKYHIVFCPKYRKPVLVGEVEKMLKEILPYKADELGAEIIEMETDKEHV
CCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCE
HLLISCDPQYGIHKVVKGLKGFSSRVLRENFPHLKSSMPSMWTNSYFVGTVGSVSLEVVK
EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCHHHHHHHH
QYIENQQVRTKK
HHHHCCCCCCCC
>Mature Secondary Structure
MYKSNKNIVYDCKYHIVFCPKYRKPVLVGEVEKMLKEILPYKADELGAEIIEMETDKEHV
CCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCE
HLLISCDPQYGIHKVVKGLKGFSSRVLRENFPHLKSSMPSMWTNSYFVGTVGSVSLEVVK
EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCHHHHHHHH
QYIENQQVRTKK
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]