| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yeiH [C]
Identifier: 126697763
GI number: 126697763
Start: 248042
End: 249073
Strand: Direct
Name: yeiH [C]
Synonym: CD0190
Alternate gene names: 126697763
Gene position: 248042-249073 (Clockwise)
Preceding gene: 126697761
Following gene: 126697764
Centisome position: 5.78
GC content: 28.39
Gene sequence:
>1032_bases ATGTTAAAGAAAAAAAGCAGTTTGACATTAAAAACTATAAGGGAAATATTACCAGGACTGTTTGTATCAGTATTAGTAGG TTATATTAGTATATTTATTTCTATTTTAATTCCTAAGGTAGGGGCAGCATCAATTTCTATATTTTTAGGTATGTTTGTAG GAAACCTATTTTTAAATCAAAAGGTATTTCAAAAAGGTTATAAATTTTCAGAGACAGATTTGTTATCATATTCAATAGTA CTATTAGGAGCAACACTCAGTGTATCTACCTTAATAGACTTAAAAGTTTCAGGAATTTTATTTATAATATTGCAAATGAC AATAACAATAATAGCTGCACTTTATATAGGTAAAAAACTAGGATTTGAAGAAAACTTTAGATTTCTAATGGCAAGTGGAA ATGCAGTATGTGGTTCTTCTGCAATAGGAGCAACAGTTCCAGTGGTTAATGCGACAGATAAAGAAAAGGGAATTGCAGTA ACTATTGTAAATGTTACTGGTATATTTCTTATGTTTTTACTTCCAATAATATCTCAATTTTTATATAGCCATGAACTTGT AAAAACTTCAGCAATGATAGGTGGAACTTTGCAATCAATTGGTCAGGTTGTAGCAAGTGGAGCAATTGTTGGAGAAAATG TAAAAGATTTAGCTACTATTTTTAAGATAGTAAGAGTAATATTTCTAGTTGTTGTTGTATTAGTATTTGGACATATGAAA AATCAATCTAATAGGGAAATTCTTGAAGAAGAAAAGGATGAGATAAAAAAGAAAAAAGTGACTATACCATGGTATGTAAT TGGATTCTTTATAACTTGTGCACTTTTTTCAATGAACATTATACCACAAGAAGTATCTGTGTTGTGCAAAGAAATAAGTA ACAAACTAGAAATAATAGCTTTAGCAGCAATTGGATTAAAGGTTAATGTAAAAGATTTAGTGAAACAAGGGAAAGAAGTT TCTTTATATGGTTTATTTGTAGGTACAGTACAAGTTGTATCAGCTGTAGTTTTAATAAAAATATTTATATAG
Upstream 100 bases:
>100_bases ATTAATCATTACGATATTATATATTTATTTTACTTATGGTTATTACAATTATATACTATTGCTATGAAGAAAACTATATT AATTATAAGGTAGGTATATT
Downstream 100 bases:
>100_bases CATAAAAATAGTATTTGTAATATTAATTTGATTAACTAAAATAATATGATACTAATAATTTATAATATAAATAAAAAATG AATTTCGATAAGTTTAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLKKKSSLTLKTIREILPGLFVSVLVGYISIFISILIPKVGAASISIFLGMFVGNLFLNQKVFQKGYKFSETDLLSYSIV LLGATLSVSTLIDLKVSGILFIILQMTITIIAALYIGKKLGFEENFRFLMASGNAVCGSSAIGATVPVVNATDKEKGIAV TIVNVTGIFLMFLLPIISQFLYSHELVKTSAMIGGTLQSIGQVVASGAIVGENVKDLATIFKIVRVIFLVVVVLVFGHMK NQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALFSMNIIPQEVSVLCKEISNKLEIIALAAIGLKVNVKDLVKQGKEV SLYGLFVGTVQVVSAVVLIKIFI
Sequences:
>Translated_343_residues MLKKKSSLTLKTIREILPGLFVSVLVGYISIFISILIPKVGAASISIFLGMFVGNLFLNQKVFQKGYKFSETDLLSYSIV LLGATLSVSTLIDLKVSGILFIILQMTITIIAALYIGKKLGFEENFRFLMASGNAVCGSSAIGATVPVVNATDKEKGIAV TIVNVTGIFLMFLLPIISQFLYSHELVKTSAMIGGTLQSIGQVVASGAIVGENVKDLATIFKIVRVIFLVVVVLVFGHMK NQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALFSMNIIPQEVSVLCKEISNKLEIIALAAIGLKVNVKDLVKQGKEV SLYGLFVGTVQVVSAVVLIKIFI >Mature_343_residues MLKKKSSLTLKTIREILPGLFVSVLVGYISIFISILIPKVGAASISIFLGMFVGNLFLNQKVFQKGYKFSETDLLSYSIV LLGATLSVSTLIDLKVSGILFIILQMTITIIAALYIGKKLGFEENFRFLMASGNAVCGSSAIGATVPVVNATDKEKGIAV TIVNVTGIFLMFLLPIISQFLYSHELVKTSAMIGGTLQSIGQVVASGAIVGENVKDLATIFKIVRVIFLVVVVLVFGHMK NQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALFSMNIIPQEVSVLCKEISNKLEIIALAAIGLKVNVKDLVKQGKEV SLYGLFVGTVQVVSAVVLIKIFI
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=326, Percent_Identity=30.3680981595092, Blast_Score=126, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 37307; Mature: 37307
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKKSSLTLKTIREILPGLFVSVLVGYISIFISILIPKVGAASISIFLGMFVGNLFLNQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KVFQKGYKFSETDLLSYSIVLLGATLSVSTLIDLKVSGILFIILQMTITIIAALYIGKKL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFEENFRFLMASGNAVCGSSAIGATVPVVNATDKEKGIAVTIVNVTGIFLMFLLPIISQF CCCCCCEEEEECCCEECCCCCCCCEECEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH LYSHELVKTSAMIGGTLQSIGQVVASGAIVGENVKDLATIFKIVRVIFLVVVVLVFGHMK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALFSMNIIPQEVSVLCKEISNKLEIIA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHEEE LAAIGLKVNVKDLVKQGKEVSLYGLFVGTVQVVSAVVLIKIFI EEHHCCEECHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKKKSSLTLKTIREILPGLFVSVLVGYISIFISILIPKVGAASISIFLGMFVGNLFLNQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KVFQKGYKFSETDLLSYSIVLLGATLSVSTLIDLKVSGILFIILQMTITIIAALYIGKKL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFEENFRFLMASGNAVCGSSAIGATVPVVNATDKEKGIAVTIVNVTGIFLMFLLPIISQF CCCCCCEEEEECCCEECCCCCCCCEECEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH LYSHELVKTSAMIGGTLQSIGQVVASGAIVGENVKDLATIFKIVRVIFLVVVVLVFGHMK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NQSNREILEEEKDEIKKKKVTIPWYVIGFFITCALFSMNIIPQEVSVLCKEISNKLEIIA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHEEE LAAIGLKVNVKDLVKQGKEVSLYGLFVGTVQVVSAVVLIKIFI EEHHCCEECHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]