Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697728

Identifier: 126697728

GI number: 126697728

Start: 206267

End: 207229

Strand: Direct

Name: 126697728

Synonym: CD0156

Alternate gene names: NA

Gene position: 206267-207229 (Clockwise)

Preceding gene: 126697727

Following gene: 126697729

Centisome position: 4.81

GC content: 28.04

Gene sequence:

>963_bases
ATGAACAAATCATGGAGCAACTTGATTATTAAGAATAAAGACAGAAAAGTACGTTCAGGGTGGATTATTATAGCTGTTAT
GGCTACCTTTTACATACTTCAGTATTATTTAAGCATGATACTTGTGGAAATAATAAGAAAAATCCTGGTTGCTACAGGTG
ACATTAATTTAAAAACAAACTATTTTTCAGAATATGCTAATTGGTTAAATGATGTTGGGTTACAGATTGTATTTCAAATT
CTAACAGATTCACTTATGATTATTATTCCTATAATTGTATGGAGATTTATTATGAAAAATCCTATTAGTGAAATGGGATT
ACATTCTTATAGAATTAAGAAAAAAGAAGGATATGTAGGAATGTTATTAGGAATATTTAATTGTACAGTAATCTTTATTA
TAACAATAACAATTGGTGGTGGTCATGTTACTTCATGGGTACCAAAAATTTCACCTTTAACAGTTTCTTGGATACTTGTC
TTTATTTTAGTTGCTTTTGCAGAAGAAATTTTAAATCGTGGTTTTTTTATGGCAGTTTTACGAAGATGTAAAAATATTTA
TTTTATAATGATTGTTCCATCTGTTATTTTTGGGTTGATTCATATATGGAATCCTGATGTTACTTTTTTGTCTGTAATTA
ATATTATAATTATTGGGATTCTTTTTTCATATATGTTTATAAAGTCGTCGAATATATGGATGTGTATAGGTTATCATTTT
ACATGGAATGTATTTCAGGGGATTATATATGGTATGCCTGTAAGTGGACTTCAGGTTCCAGGGATTATAACTACACAAAT
CACTCATGGTAATCTATTAAATGGAGGGATGTTTGGTATTGAAGGTGGAATTTTGACTACTTTTGTTAATCTACTTAGCT
TTATATTTGTATGGTATTACTATAGAGATTCTAAGTATGATTTTGTTAGTGATAAAGTAAATGTGACCAATATCAAGAAT
TAG

Upstream 100 bases:

>100_bases
ATTGAAGCAGAAGTTTTGTGGTAAAATACTACTATGAAAAAATTTAATAGAATATATTTTAGAAACAACTAAAAATAATA
GTTAGGAGGAAGACATCTAT

Downstream 100 bases:

>100_bases
TTGATTATAATAAATTTTAATAATATCTTCTAAGCTTAAAGTATTCTGTAGGATTGTTGGAAATTTACAAAAATATAAAA
ATAACTTGGATATTCTATTT

Product: membrane-associated CAAX amino terminal protease

Products: NA

Alternate protein names: Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease; CAAX Amino Terminal Protease Family; CAAX Amino Protease Family Protein; Protease; Caax Amino Protease Family; Membrane-Associated CAAX Amino Terminal Protease; Transmembrane Protein; Caax Amino Terminal Protease Family; Protease CAAX Amino Terminal Family; CAAX-Like Membrane Endopeptidase

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTNYFSEYANWLNDVGLQIVFQI
LTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV
FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF
TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN

Sequences:

>Translated_320_residues
MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTNYFSEYANWLNDVGLQIVFQI
LTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV
FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF
TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN
>Mature_320_residues
MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTNYFSEYANWLNDVGLQIVFQI
LTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVGMLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILV
FILVAFAEEILNRGFFMAVLRRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF
TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYYYRDSKYDFVSDKVNVTNIKN

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36773; Mature: 36773

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTN
CCCCCCCCEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
YFSEYANWLNDVGLQIVFQILTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEECCCCHHH
MLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILVFILVAFAEEILNRGFFMAVL
HHHHHHHHHEEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF
HHHCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEH
TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYY
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
YRDSKYDFVSDKVNVTNIKN
HCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MNKSWSNLIIKNKDRKVRSGWIIIAVMATFYILQYYLSMILVEIIRKILVATGDINLKTN
CCCCCCCCEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH
YFSEYANWLNDVGLQIVFQILTDSLMIIIPIIVWRFIMKNPISEMGLHSYRIKKKEGYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEEECCCCHHH
MLLGIFNCTVIFIITITIGGGHVTSWVPKISPLTVSWILVFILVAFAEEILNRGFFMAVL
HHHHHHHHHEEEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RRCKNIYFIMIVPSVIFGLIHIWNPDVTFLSVINIIIIGILFSYMFIKSSNIWMCIGYHF
HHHCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEH
TWNVFQGIIYGMPVSGLQVPGIITTQITHGNLLNGGMFGIEGGILTTFVNLLSFIFVWYY
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHH
YRDSKYDFVSDKVNVTNIKN
HCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA