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The map label for this gene is ydiC [H]

Identifier: 126697722

GI number: 126697722

Start: 199539

End: 200255

Strand: Direct

Name: ydiC [H]

Synonym: CD0150

Alternate gene names: 126697722

Gene position: 199539-200255 (Clockwise)

Preceding gene: 126697721

Following gene: 126697723

Centisome position: 4.65

GC content: 28.73

Gene sequence:

>717_bases
ATGAAAATACTAGGTATGGATACGTCTTCTATGGCAGCAAGTGTAGCAGTTGTTGAAGATGATAAATTAATATGTGAGTT
TACAGTAAACAACAAAAAAACTCATTCACAAAAGCTTATGCCAATGATAGAAAATATGTTGAGTATGAGTGATTTAAGTA
TAAAAGATATGGATTTATTAGCTGTATGTATAGGTCCAGGTTCGTTTACAGGACTTAGAATAGGTATGGCTACAGTAAAA
GCTATGGCCCATGTAAATAATATACCAATAATAGCAGTAAATTCTTTGGAATCTCTAGCAAATAACATAAATTTCTGTGA
TAGAAAGATATGTTGTATATTAGATGCGCAGAAAAATCAAGTTTATTCAGCTAAATACAAGTTTGAAAATGGAGAGATGA
TAGAATTAGATGGTGTTGATGTTGTAGAGTTTGATGCTTTAGTAGATGAAATTGTATCAACTAATGAAGAATTTATAATA
GTTGGAGAAGCTGTATACAAATATAAAGACAAGTTAGAGAATATAAAAAATATAAAAATACCTTCACCAGCTAATAATGT
ATCTAAAGCAGGAAGCTTATGCTCTTTAGCATTAAATAAATATAATAAAAATATAGATGTACATACTTGTTATACGATAA
ATCCTATGTATATCAGAAAATCTCAAGCTGAAGTACAATATGATGAAAAAATGAAGAGGCTAAATAATGGAAGATAA

Upstream 100 bases:

>100_bases
ATTTGAATATAGAATTGAGATATAAAGATGAAGGAAGAGAAATGATATTAACTCCAAAAGGAGAGTTTTATAAAGAGATA
GTTGAGGAGTTGATTAAATA

Downstream 100 bases:

>100_bases
TACAAAACTAATAGTAGATGATATAAAAATAGAAGAAATGACTACAGAAGATATAGATGAAGTTTTTGAAGTAGAAAAAA
ATTGTTTTGAAGATTATTGG

Product: glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKILGMDTSSMAASVAVVEDDKLICEFTVNNKKTHSQKLMPMIENMLSMSDLSIKDMDLLAVCIGPGSFTGLRIGMATVK
AMAHVNNIPIIAVNSLESLANNINFCDRKICCILDAQKNQVYSAKYKFENGEMIELDGVDVVEFDALVDEIVSTNEEFII
VGEAVYKYKDKLENIKNIKIPSPANNVSKAGSLCSLALNKYNKNIDVHTCYTINPMYIRKSQAEVQYDEKMKRLNNGR

Sequences:

>Translated_238_residues
MKILGMDTSSMAASVAVVEDDKLICEFTVNNKKTHSQKLMPMIENMLSMSDLSIKDMDLLAVCIGPGSFTGLRIGMATVK
AMAHVNNIPIIAVNSLESLANNINFCDRKICCILDAQKNQVYSAKYKFENGEMIELDGVDVVEFDALVDEIVSTNEEFII
VGEAVYKYKDKLENIKNIKIPSPANNVSKAGSLCSLALNKYNKNIDVHTCYTINPMYIRKSQAEVQYDEKMKRLNNGR
>Mature_238_residues
MKILGMDTSSMAASVAVVEDDKLICEFTVNNKKTHSQKLMPMIENMLSMSDLSIKDMDLLAVCIGPGSFTGLRIGMATVK
AMAHVNNIPIIAVNSLESLANNINFCDRKICCILDAQKNQVYSAKYKFENGEMIELDGVDVVEFDALVDEIVSTNEEFII
VGEAVYKYKDKLENIKNIKIPSPANNVSKAGSLCSLALNKYNKNIDVHTCYTINPMYIRKSQAEVQYDEKMKRLNNGR

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=174, Percent_Identity=31.0344827586207, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 26521; Mature: 26521

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILGMDTSSMAASVAVVEDDKLICEFTVNNKKTHSQKLMPMIENMLSMSDLSIKDMDLL
CEEECCCCHHHHEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
AVCIGPGSFTGLRIGMATVKAMAHVNNIPIIAVNSLESLANNINFCDRKICCILDAQKNQ
EEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCEEEEEEECCCCC
VYSAKYKFENGEMIELDGVDVVEFDALVDEIVSTNEEFIIVGEAVYKYKDKLENIKNIKI
EEEEEEEECCCCEEEECCCCEEHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEEEC
PSPANNVSKAGSLCSLALNKYNKNIDVHTCYTINPMYIRKSQAEVQYDEKMKRLNNGR
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKILGMDTSSMAASVAVVEDDKLICEFTVNNKKTHSQKLMPMIENMLSMSDLSIKDMDLL
CEEECCCCHHHHEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
AVCIGPGSFTGLRIGMATVKAMAHVNNIPIIAVNSLESLANNINFCDRKICCILDAQKNQ
EEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCEEEEEEECCCCC
VYSAKYKFENGEMIELDGVDVVEFDALVDEIVSTNEEFIIVGEAVYKYKDKLENIKNIKI
EEEEEEEECCCCEEEECCCCEEHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCEEEC
PSPANNVSKAGSLCSLALNKYNKNIDVHTCYTINPMYIRKSQAEVQYDEKMKRLNNGR
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]