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The map label for this gene is ydiB [H]

Identifier: 126697721

GI number: 126697721

Start: 199087

End: 199539

Strand: Direct

Name: ydiB [H]

Synonym: CD0149

Alternate gene names: 126697721

Gene position: 199087-199539 (Clockwise)

Preceding gene: 126697720

Following gene: 126697722

Centisome position: 4.64

GC content: 26.49

Gene sequence:

>453_bases
ATGGCAAAAATATATTTAGAAAATGAAAATAAAACTAGAGAAATAGGATATAAATTAGGTAAACTTTTAAAAGAAGGCAG
TGTTATCTGTTTAGTAGGAGATTTAGGAGCTGGTAAAACTACAATGACACAAAGTTTGGCAGATTCATTAGGGATAGAAG
ATTATATAACAAGTCCTACTTTTACTATAATAAATGAATATGAAGGAAAAATACCTTTGTATCATTTTGATGTTTATAGA
ATAGGTAGTAGTGATGAAATGTATGATATTGGTTATGATGAATATGTAAATTCAAATGGAATCTGTATAATAGAATGGGC
TAATCTAATAGAAGATATACTTCCAAAAGAATATTTGAATATAGAATTGAGATATAAAGATGAAGGAAGAGAAATGATAT
TAACTCCAAAAGGAGAGTTTTATAAAGAGATAGTTGAGGAGTTGATTAAATAA

Upstream 100 bases:

>100_bases
GATAAAGACAAGTACTTTATAATAATCTAGGCTTATACTATAATTAATTAAGCAGTGATATAAATTCACATGACGATTAT
ATCAAAATGGAGATGAATTG

Downstream 100 bases:

>100_bases
TGAAAATACTAGGTATGGATACGTCTTCTATGGCAGCAAGTGTAGCAGTTGTTGAAGATGATAAATTAATATGTGAGTTT
ACAGTAAACAACAAAAAAAC

Product: ATP/GTP hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MAKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQSLADSLGIEDYITSPTFTIINEYEGKIPLYHFDVYR
IGSSDEMYDIGYDEYVNSNGICIIEWANLIEDILPKEYLNIELRYKDEGREMILTPKGEFYKEIVEELIK

Sequences:

>Translated_150_residues
MAKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQSLADSLGIEDYITSPTFTIINEYEGKIPLYHFDVYR
IGSSDEMYDIGYDEYVNSNGICIIEWANLIEDILPKEYLNIELRYKDEGREMILTPKGEFYKEIVEELIK
>Mature_149_residues
AKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQSLADSLGIEDYITSPTFTIINEYEGKIPLYHFDVYRI
GSSDEMYDIGYDEYVNSNGICIIEWANLIEDILPKEYLNIELRYKDEGREMILTPKGEFYKEIVEELIK

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=129, Percent_Identity=34.8837209302326, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17227; Mature: 17096

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQSLADSLGIEDYITSPT
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCE
FTIINEYEGKIPLYHFDVYRIGSSDEMYDIGYDEYVNSNGICIIEWANLIEDILPKEYLN
EEEEECCCCCCEEEEEEEEEECCCCCEEECCHHHHCCCCCEEEEEHHHHHHHHCCHHHEE
IELRYKDEGREMILTPKGEFYKEIVEELIK
EEEEECCCCCEEEECCCCHHHHHHHHHHHC
>Mature Secondary Structure 
AKIYLENENKTREIGYKLGKLLKEGSVICLVGDLGAGKTTMTQSLADSLGIEDYITSPT
EEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCE
FTIINEYEGKIPLYHFDVYRIGSSDEMYDIGYDEYVNSNGICIIEWANLIEDILPKEYLN
EEEEECCCCCCEEEEEEEEEECCCCCEEECCHHHHCCCCCEEEEEHHHHHHHHCCHHHEE
IELRYKDEGREMILTPKGEFYKEIVEELIK
EEEEECCCCCEEEECCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]