Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

Click here to switch to the map view.

The map label for this gene is 126697687

Identifier: 126697687

GI number: 126697687

Start: 158967

End: 159182

Strand: Direct

Name: 126697687

Synonym: CD0115

Alternate gene names: NA

Gene position: 158967-159182 (Clockwise)

Preceding gene: 126697686

Following gene: 126697688

Centisome position: 3.71

GC content: 32.87

Gene sequence:

>216_bases
ATGGCTAAAGGAAAAGTATCTTTTAATCAAGAACGTTGTAAAGGTTGTGGATTGTGTGTTGAAGCATGTCCAGTAAAAAT
CATACAATTAGACTCAAATGTAATAAACAAAAAAGGGTATAACCCAGCAACTGTTTTTGAAATGGAAAAATGCATAGGAT
GTGCAAGTTGTGCAACTATGTGTCCAGATGTAGTTATAACAGTAGAAAGAGATTAA

Upstream 100 bases:

>100_bases
AGATTTAGAAGGAGAAATTTTTCCTATAAAATTATATATGAGAGAAGACTGGATGTAGTTTGAGCTCAAATATATAGAAA
GTTTAAGGAGGCTTAGGTAA

Downstream 100 bases:

>100_bases
TTTAATTAATATTTAAGGGGGAATTTTAATGGCTAAGATACTTATGAAAGGTAACGAAGCATTTGGAAAAGCAGCTATAG
AAGCTGGTTGCAAATATTTC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin; 2-Oxoglutarate Ferredoxin Oxidoreductase Subunit Delta; 2-OxoacidAcceptor Oxidoreductase Delta Subunit; Ferredoxin 4Fe-4S; Keto/Oxoacid Ferredoxin Oxidoreductase Subunit Delta; 2-Oxoisovalerate Oxidoreductase Gamma Subunit; 2-Ketoglutarate Ferredoxin Oxidoreductase Subunit Delta; Ketoisovalerate Oxidoreductase Subunit VorC; Photosystem I Iron-Sulfur Protein PsaC; 3-Methyl-2-Oxobutanoate Dehydrogenase Delta Subunit

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD

Sequences:

>Translated_71_residues
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>Mature_70_residues
AKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7689; Mature: 7558

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
15.5 %Cys+Met (Translated Protein)
11.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
14.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATM
CCCCCCCCCHHHHCCCCEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHC
CPDVVITVERD
CCCEEEEEECC
>Mature Secondary Structure 
AKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATM
CCCCCCCCHHHHCCCCEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCHHHHHHC
CPDVVITVERD
CCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA