| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697686
Identifier: 126697686
GI number: 126697686
Start: 158247
End: 158924
Strand: Direct
Name: 126697686
Synonym: CD0114
Alternate gene names: NA
Gene position: 158247-158924 (Clockwise)
Preceding gene: 126697685
Following gene: 126697687
Centisome position: 3.69
GC content: 30.24
Gene sequence:
>678_bases ATGATAACTAATGATAAAAGAATAAGAATCATAACTGGTCACTATGGAAGTGGTAAAAGTGAATTTGCGATGAACTATGT TGTTAAGTTAAGAGATATGGTTTCTGGCAAAGTTGCTATAGCCGATTTAGATGTGGTAAATGTATACTTTAGAACTAGAG AAAAGAAAGAGTTAATGAAATCCTTAGGTATACAACCAATAGATAGCTCAATTAATGCTCCAACATTAGATTTACCAGCA GTATCAGCAGAGGTAATGTCTCCTATGGTAGACCATTCATACAATTCTGTTATAGATTTAGGTGGAGATAATGTAGGTGC TAGGGTTATAGGAAGATTTAGTCATTTGTTAAAAGAAGGCGATTATGATATGCTTTTTGTAATAAATGCAAATAGGGAGA AAACTCAAACTTCTGAAGAAGTTATCCAATATATAAAAGAAATAGAAAAATCTTCTAAATTAAAGGTAACAGGTCTAATT AATAATACTCATCTTATTAGGTTTACTACTATTGATGATGTTTTAAGAGGTCAGAAAGTTGCAAAAGAAGTTTCTGAAAA ATGTAATATACCGATAAGATATGTTGCATGTTTAGAAAATCTTGTTGAACAGTTACCAAAAGATTTAGAAGGAGAAATTT TTCCTATAAAATTATATATGAGAGAAGACTGGATGTAG
Upstream 100 bases:
>100_bases TTTATAGCAGATGTAAAAGTTTATCCAGGTGAAGATGAAATGATTGCATTAGCTCAAGGTGGACTTAGAGTTTTAACTGG TGAAGAAGAGGCTCAAGTTT
Downstream 100 bases:
>100_bases TTTGAGCTCAAATATATAGAAAGTTTAAGGAGGCTTAGGTAAATGGCTAAAGGAAAAGTATCTTTTAATCAAGAACGTTG TAAAGGTTGTGGATTGTGTG
Product: ATP/GTP-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPA VSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLI NNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
Sequences:
>Translated_225_residues MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPA VSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLI NNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM >Mature_225_residues MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPA VSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLI NNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25499; Mature: 25499
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMK CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHEEHHHHHCCHHHHHHH SLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEG HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCC DYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKV CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECHHHHHHHHHH AKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM HHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCEEEEEEEEECCCC >Mature Secondary Structure MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMK CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHEEHHHHHCCHHHHHHH SLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEG HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCC DYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKV CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECHHHHHHHHHH AKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM HHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA