Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697682

Identifier: 126697682

GI number: 126697682

Start: 154769

End: 155950

Strand: Direct

Name: 126697682

Synonym: CD0111

Alternate gene names: NA

Gene position: 154769-155950 (Clockwise)

Preceding gene: 126697681

Following gene: 126697683

Centisome position: 3.61

GC content: 27.16

Gene sequence:

>1182_bases
ATGATAAATAGACTAAAAAATAATACCAAAATAAAAATAATATCATTTTTAAGTGCAATTGCATTATGGATGTATGTTAT
GGCTGTAGTTGACCCTGAAGAAACTAAAGGGTTTGAAGATATACCTGTATCTATAAGTAATATGAGTGATTTAAAGGATA
AAAATCTTGTTATATATCCAGACGAAAAATTAACAGCAGATGTATATATAAAAGGTAGTTTATCAAAGGTACAAAGTGTT
AAAAAAGAAGATATACATGTATATGGAACCATTGAAGACCCAATACAAGGACAGAAGGAAGTATATTTAAAAGCAAATAT
TCCTCAAGGTGTTACTCTAGAATTTAAGCATGATGTTTTAGTAGTAAATCTTGAAAAAAACATAAAAGAAAAAAGAGATA
TAAAGGTAGAAGTAAGTGGAAATTCAAAAAGAAATATAAATAAAATTGAACTTAGTAAGGAATTTGTCGATGTATCAGGT
CCAAGAACTCTAGTTAAAGAAGTCAAAAGTGTAAGAGCTAATCTAGATGTTGGTAATGAGACAGATGATTTTTCTAAAAA
ATTGCAATTAATACCATTAAATAGTGATGGAACTAAGGTTGAAGGAGTAACATTAAGTTCATCCTTTGTGACTGCAAAGA
TAGAGCTATTGAAGGAAAAAATTGTCCCAATAAGAGTAAGTCTAAATGATAATAAAGATAATGATGTACTGAAAAACTAT
AAATTAAGTAAGGAACAAGTTACAATAAAAGGAAAGAAAGAAGATATAGACAAAATAAGTTATATTAAGACAAAACCTAT
TGACTTAGCTGATTTGGCTAATGGTGAAGAAAAAGAAGTTAGCTTAGAAATTCCAGAGGGTATAACTCTTGAGGATAGCT
CTATAACAATTAAATTAAATGATACAAAACAATTGAGTGCAGAATTTTTATATAATGCGGGAGATATTGAATTAAGAAAT
ATCCCAACAAATATGGATAATCCAAATGTAATTTCTGATGTAGATATAAAAGTTGTTGTAGAGTCAACGGAGGATTTGAG
TAAGTTAAATAAAAAAGATATTTCATTATATATTGATTTATCACAAGGCCCTGAGGAAGATAGTAAATATAAAATAAAAT
ATGAAACAACATATCAATTTAAAAAAATAAATATAGAACCTAATATTGTTGAAGTGGAATGA

Upstream 100 bases:

>100_bases
TATATAGAGATATTTCTAGAGAAAGAATGATGAATATATTACGTAGTAATTTAAAAACAAATACAGAAACAAGAAGTTTT
TTCAAAGGTGGTATATTTAA

Downstream 100 bases:

>100_bases
ACAAATATTTCGAATATTTAGTTGTTACAAGATGCGACAAAAAAACCTATAAAATTAAGTTTGTTAATTTTATGTTTTTG
TTGCATCTTGTTTATTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: YbbR-Like Protein; Membrane Associated Protein

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSV
KKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSG
PRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNY
KLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRN
IPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE

Sequences:

>Translated_393_residues
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSV
KKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSG
PRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNY
KLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRN
IPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>Mature_393_residues
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSV
KKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSG
PRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNY
KLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRN
IPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44352; Mature: 44352

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYP
CCCCCCCCCEEEHHHHHHHHHHHHHHHHEECCHHHCCCCCCCEEECCCCCCCCCCEEEEC
DEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVL
CCCEEEEEEEECCHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCEE
VVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNE
EEEECCCCCCCCCEEEEECCCCCCCCEEEEEEHHEECCCCCHHHHHHHHHHHCCCCCCCC
TDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNY
CCCCCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCC
KLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLN
CCCCEEEEEECCCCCCCHHHEEECCCCCHHHCCCCCCCEEEEECCCCCEEECCEEEEEEC
DTKQLSAEFLYNAGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDL
CCHHHHHHHEECCCCEEEEECCCCCCCCCEEECCEEEEEEECCHHHHHCCCCEEEEEEEC
SQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
CCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEC
>Mature Secondary Structure
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYP
CCCCCCCCCEEEHHHHHHHHHHHHHHHHEECCHHHCCCCCCCEEECCCCCCCCCCEEEEC
DEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVL
CCCEEEEEEEECCHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCEE
VVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNE
EEEECCCCCCCCCEEEEECCCCCCCCEEEEEEHHEECCCCCHHHHHHHHHHHCCCCCCCC
TDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNY
CCCCCCEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHCCEEEEEEECCCCCCCHHHCC
KLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLN
CCCCEEEEEECCCCCCCHHHEEECCCCCHHHCCCCCCCEEEEECCCCCEEECCEEEEEEC
DTKQLSAEFLYNAGDIELRNIPTNMDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDL
CCHHHHHHHEECCCCEEEEECCCCCCCCCEEECCEEEEEEECCHHHHHCCCCEEEEEEEC
SQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
CCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA