Click here to switch to the map view.

The map label for this gene is 262192879

Identifier: 262192879

GI number: 262192879

Start: 1534406

End: 1535785

Strand: Direct

Name: 262192879

Synonym: BMA10247_A1599

Alternate gene names: NA

Gene position: 1534406-1535785 (Clockwise)

Preceding gene: 126447583

Following gene: 126445599

Centisome position: 65.22

GC content: 64.86

Gene sequence:

>1380_bases
TTGGCCCTATCGAAGGGGGCAGGTCACATCGGCTCGGCCAATAGCTCGATTGCTTCGTTGTCCACGTCGACCTCGACCGG
CATCAGTTCGTTGTCCACCGGCTTGAGTACCACCGACAGCAATCTCACGTCGCTGTCGACCTCCACCTCGACCGGCCTCT
CGTCGGCCAACAGCTCGATCACCTCCCTTTCGAGCGGACTGAGCACGACCAACAGCAACGTCGCCTCGCTGTCAACCGGC
CTGAGCAGCACGAACAGCTCGCTGACCTCGCTTTCAACGTCCGCTTCCTCCGGCATCAGCACCGCGCAGAGCGGCGTCAA
TTCGCTGTCGACCGGACTGTCGACGACCAATAGCACGGTTGCTTCGTTGTCCACGTCGACCTCGACCGGCATCAGCTCGC
TGTCCACCGGCCTGAGCACCACCGACAGCAACCTCGCCTCGCTGTCGACCTCCACGTCGACCGGCCTCTCGTCAACAACC
AGCTCGATCGCTTCGCTCTCGACGTCGACCTCGACGAGCTTCTCGTCGGCGCTGAGCTCGATCGGCTCGCTGTCCACCGG
CCTGTCGACCACCAACAGCAACGTCGCCTCGCTGTCCACGTCCACCTCGACGGCCGTCGGCTCGCTGTCCACCAGCCTGT
CGACCACCAACAGCAACGTCGCGTCGCTGTCCACGTCGACTTCGACAAACGTGAACTCGCTGTCCACCGGCCTGTCGACG
ACGAACACGAGCGTCGCGTCGCTGTCGACGAGCGTGACCAACCTCAACACGCAGCTCACGTCGCTGTCGACGACGATCGT
CAACAGCACGAACAACGTGATCCGCGCGCTGCCGGCGAGCACGGGCATCGCCGCCGACATGAGCGCGCCGAACGCCGCCG
CGCCGTCCGTCACGGCCGGCTCGAACTCGGTCGCGCTCGGCGCGAACTCGACCGACGGCGGCCGCTCGAACGTCGTCTCG
GTCGGCAGCGCCACGCAGCAGCGGCAAATCACGAACGTCGCCGCCGGCACCGAAGGCACCGACGCGGTCAACGTCAACCA
GTTGAATGCGCTGTCCACTTCTATGTCACAATCTCTGGCGGGCCAGCAGGGCCAGATCAACAATCTGGGCTCGCAGCTGA
CCCAGACTCAGCAAGCGCTGCAGCAGACCGATACGATGGCCCGTCAGGGCATCGCGGCCGCCACCGCGCTGACGATGCTG
CCGCAGGTCGAGCCGGGCAAGACGATCAATGTCGCCGTCGGCGTCGCCCGCTTCGCAGGTCAGTCGGGGATGGCGTTCGG
CGCGAGCGCGCACGTGACAACCAACGGCATTCTCAAACTGGGCATCGGCGTGTCGGGGCAGAACAAGACCTTCGGTGCAG
GATATGGATATAGCTGGTGA

Upstream 100 bases:

>100_bases
CTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGCGGACGCTCCTGCCGCTTTCCAGGAGTTGGTTTAAA
GGGACTTTGCTAGAAGCCCA

Downstream 100 bases:

>100_bases
TCGATTCCATCCGCTCTTCGTCAACCGGGCCGCGTGACGCGCCCGGCAAGCGCCTCGCCGTCGGCATCTCGCTGTTCGCC
CGCGACGGTCAGGCGATCTG

Product: YadA-like C-terminal region protein

Products: NA

Alternate protein names: Membrane-Anchored Cell Surface Protein; Hemagluttinin Domain-Containing Protein; Hemagglutinin Family Protein; Haemagglutinin-Related Autotransporter Protein; Outer Membrane Protein; Haemagluttinin Family Protein; Autotransporter Adhesin; Haemagglutinin Family Protein; Surface Protein; YadA-Like C-Terminal Region Protein; Haemagluttinin Domain Protein; Haemagglutinin; Surface-Exposed Protein; Hep_Hag Family; Hemagglutinin Domain-Containing Protein; Hep_Hag Family Protein; Hemagluttinin Motif-Containing Protein; Surface-Exposed Adhesin Protein; Membrane-Anchored Cell Surface Protein Haemagluttinin; Hemagglutinin; Haemagglutinin And Invasin Like Cell Surface Protein; Intracellular Motility Protein A; Hemagglutinin-Related Protein; Adhesin; YadA-Like C-Terminal Domain-Containing; Hemagluttinin Family Protein; YadA Domain Protein; YadA/Haemagluttinin Like Protein; Hemaglutinin/Autotransporter Like Protein; Outer Membrane Protein Haemagluttinin-Like

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MALSKGAGHIGSANSSIASLSTSTSTGISSLSTGLSTTDSNLTSLSTSTSTGLSSANSSITSLSSGLSTTNSNVASLSTG
LSSTNSSLTSLSTSASSGISTAQSGVNSLSTGLSTTNSTVASLSTSTSTGISSLSTGLSTTDSNLASLSTSTSTGLSSTT
SSIASLSTSTSTSFSSALSSIGSLSTGLSTTNSNVASLSTSTSTAVGSLSTSLSTTNSNVASLSTSTSTNVNSLSTGLST
TNTSVASLSTSVTNLNTQLTSLSTTIVNSTNNVIRALPASTGIAADMSAPNAAAPSVTAGSNSVALGANSTDGGRSNVVS
VGSATQQRQITNVAAGTEGTDAVNVNQLNALSTSMSQSLAGQQGQINNLGSQLTQTQQALQQTDTMARQGIAAATALTML
PQVEPGKTINVAVGVARFAGQSGMAFGASAHVTTNGILKLGIGVSGQNKTFGAGYGYSW

Sequences:

>Translated_459_residues
MALSKGAGHIGSANSSIASLSTSTSTGISSLSTGLSTTDSNLTSLSTSTSTGLSSANSSITSLSSGLSTTNSNVASLSTG
LSSTNSSLTSLSTSASSGISTAQSGVNSLSTGLSTTNSTVASLSTSTSTGISSLSTGLSTTDSNLASLSTSTSTGLSSTT
SSIASLSTSTSTSFSSALSSIGSLSTGLSTTNSNVASLSTSTSTAVGSLSTSLSTTNSNVASLSTSTSTNVNSLSTGLST
TNTSVASLSTSVTNLNTQLTSLSTTIVNSTNNVIRALPASTGIAADMSAPNAAAPSVTAGSNSVALGANSTDGGRSNVVS
VGSATQQRQITNVAAGTEGTDAVNVNQLNALSTSMSQSLAGQQGQINNLGSQLTQTQQALQQTDTMARQGIAAATALTML
PQVEPGKTINVAVGVARFAGQSGMAFGASAHVTTNGILKLGIGVSGQNKTFGAGYGYSW
>Mature_458_residues
ALSKGAGHIGSANSSIASLSTSTSTGISSLSTGLSTTDSNLTSLSTSTSTGLSSANSSITSLSSGLSTTNSNVASLSTGL
SSTNSSLTSLSTSASSGISTAQSGVNSLSTGLSTTNSTVASLSTSTSTGISSLSTGLSTTDSNLASLSTSTSTGLSSTTS
SIASLSTSTSTSFSSALSSIGSLSTGLSTTNSNVASLSTSTSTAVGSLSTSLSTTNSNVASLSTSTSTNVNSLSTGLSTT
NTSVASLSTSVTNLNTQLTSLSTTIVNSTNNVIRALPASTGIAADMSAPNAAAPSVTAGSNSVALGANSTDGGRSNVVSV
GSATQQRQITNVAAGTEGTDAVNVNQLNALSTSMSQSLAGQQGQINNLGSQLTQTQQALQQTDTMARQGIAAATALTMLP
QVEPGKTINVAVGVARFAGQSGMAFGASAHVTTNGILKLGIGVSGQNKTFGAGYGYSW

Specific function: Unknown

COG id: COG5295

COG function: function code UW; Autotransporter adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44449; Mature: 44318

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSKGAGHIGSANSSIASLSTSTSTGISSLSTGLSTTDSNLTSLSTSTSTGLSSANSSI
CCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHH
TSLSSGLSTTNSNVASLSTGLSSTNSSLTSLSTSASSGISTAQSGVNSLSTGLSTTNSTV
HHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHCCHHHHHHHHHHHHHCCCCCCCHH
ASLSTSTSTGISSLSTGLSTTDSNLASLSTSTSTGLSSTTSSIASLSTSTSTSFSSALSS
HEECCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
IGSLSTGLSTTNSNVASLSTSTSTAVGSLSTSLSTTNSNVASLSTSTSTNVNSLSTGLST
HHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCC
TNTSVASLSTSVTNLNTQLTSLSTTIVNSTNNVIRALPASTGIAADMSAPNAAAPSVTAG
CCCHHHHHHHHHHHCCHHHHHHEEEEECCCCHHEEECCCCCCCEECCCCCCCCCCCEECC
SNSVALGANSTDGGRSNVVSVGSATQQRQITNVAAGTEGTDAVNVNQLNALSTSMSQSLA
CCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHC
GQQGQINNLGSQLTQTQQALQQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCC
QSGMAFGASAHVTTNGILKLGIGVSGQNKTFGAGYGYSW
CCCCEECCCCEEECCCEEEEEECCCCCCCCEECCCCCCC
>Mature Secondary Structure 
ALSKGAGHIGSANSSIASLSTSTSTGISSLSTGLSTTDSNLTSLSTSTSTGLSSANSSI
CCCCCCCCCCCCCCCHHEECCCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHH
TSLSSGLSTTNSNVASLSTGLSSTNSSLTSLSTSASSGISTAQSGVNSLSTGLSTTNSTV
HHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHCCHHHHHHHHHHHHHCCCCCCCHH
ASLSTSTSTGISSLSTGLSTTDSNLASLSTSTSTGLSSTTSSIASLSTSTSTSFSSALSS
HEECCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
IGSLSTGLSTTNSNVASLSTSTSTAVGSLSTSLSTTNSNVASLSTSTSTNVNSLSTGLST
HHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCC
TNTSVASLSTSVTNLNTQLTSLSTTIVNSTNNVIRALPASTGIAADMSAPNAAAPSVTAG
CCCHHHHHHHHHHHCCHHHHHHEEEEECCCCHHEEECCCCCCCEECCCCCCCCCCCEECC
SNSVALGANSTDGGRSNVVSVGSATQQRQITNVAAGTEGTDAVNVNQLNALSTSMSQSLA
CCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHC
GQQGQINNLGSQLTQTQQALQQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCC
QSGMAFGASAHVTTNGILKLGIGVSGQNKTFGAGYGYSW
CCCCEECCCCEEECCCEEEEEECCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA