| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 262192878
Identifier: 262192878
GI number: 262192878
Start: 392901
End: 393806
Strand: Direct
Name: 262192878
Synonym: BMA10247_A0450
Alternate gene names: NA
Gene position: 392901-393806 (Clockwise)
Preceding gene: 126447517
Following gene: 126446019
Centisome position: 16.7
GC content: 74.06
Gene sequence:
>906_bases ATGAGCACGATGCAGACGACGCCGGCCTGCGACGGCGAGCCGCCCGCCTGGTACGGCAAGATTCCGGGCGCGGGCGACTT CGTCAATCACCGGCTGTCGCACGAGCTCGCGGGCTGGTGGGAGCGCTGGCTCCAGCAGGGCATGGCCGCGATGCGCCAGC GCGGCGACGACGAGCTCGCGCGTTACTACACGGTCGCGCCGGTCTGGAACTTCCTGATTCCGGCGGGCGCGGGCGCGCAG TGCGTGCAGCCGGGCTGTCTCGCGCCGAGTTGCGATCGCGTCGGCCGCTACTACCCGGTGATCGCGACGCTGCCGATGCG CACCGCCGATTACTGGAGCGCGCTGCCGGACGCCGCCGACGCGTTCTATTGGCAGGTCGGCAGCGCGCTGCTCGATGCGA TCCGGCATGCGCGCGCGCCGGTGCAGCTCGAGCAGGCGCTCGCGAAGGTGCGGCTCGTGCCGGGCGCGGCCGCGGGTTCG GCGTGGTTCGGCGGCGCGGGGGACGGGCCCGGTGAGCGCGATTGGCGCGGCGGCGCGCGCGATGCGGCCCGCGAAAGCGA TGCGGGCTGGGCGATCGGCGGAGCGGGCGATATCGACGGAGCGGGCGTGCGCGGTGCGGGCGATGAAGGCGACGGAGGCG ATAGAGGCGAGGCGGGCGGCATGAGCAGTGTGGGCGCAGCGGACGGCGGCGACGCGCGCAACGGCGCGCTCGCGCAGCCG ATGCCGAGCCCGCCCGCGACGCCCGCTTGGCCGGGACTTTCGCAGTATTTCGATCCGCACGGCGCGACGAGCTTCTGGTG GACCAATCGCGCCGACGGCTCGCCGCTGCGCACGCACGCGCATACCGGCGCGCCGGACAGCCGGCTGTTCCTGCGGCTGT TCGGCGGCGTTCAGCACGGCGTGTAG
Upstream 100 bases:
>100_bases CGGTCGACGGCAAGCCGATCGTGCTGCAGGTGACGGCGAGCAGCGTTCGCAACCCGTTCCGGTTGCCGCAGATGGAGTCC TTTACATGTCCTCCGAAGCA
Downstream 100 bases:
>100_bases CGGGCGCGCGGAGGGCGCGCATGCGGAGGATGCATGCGGCGCGCGCATGCTGGAATGCACGCAACCGGCGCATGCGACGC GGACGTAACGGTGTAACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System-Associated Protein; Conserved Protein; Type VI Secretion System Protein ImpM
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSTMQTTPACDGEPPAWYGKIPGAGDFVNHRLSHELAGWWERWLQQGMAAMRQRGDDELARYYTVAPVWNFLIPAGAGAQ CVQPGCLAPSCDRVGRYYPVIATLPMRTADYWSALPDAADAFYWQVGSALLDAIRHARAPVQLEQALAKVRLVPGAAAGS AWFGGAGDGPGERDWRGGARDAARESDAGWAIGGAGDIDGAGVRGAGDEGDGGDRGEAGGMSSVGAADGGDARNGALAQP MPSPPATPAWPGLSQYFDPHGATSFWWTNRADGSPLRTHAHTGAPDSRLFLRLFGGVQHGV
Sequences:
>Translated_301_residues MSTMQTTPACDGEPPAWYGKIPGAGDFVNHRLSHELAGWWERWLQQGMAAMRQRGDDELARYYTVAPVWNFLIPAGAGAQ CVQPGCLAPSCDRVGRYYPVIATLPMRTADYWSALPDAADAFYWQVGSALLDAIRHARAPVQLEQALAKVRLVPGAAAGS AWFGGAGDGPGERDWRGGARDAARESDAGWAIGGAGDIDGAGVRGAGDEGDGGDRGEAGGMSSVGAADGGDARNGALAQP MPSPPATPAWPGLSQYFDPHGATSFWWTNRADGSPLRTHAHTGAPDSRLFLRLFGGVQHGV >Mature_300_residues STMQTTPACDGEPPAWYGKIPGAGDFVNHRLSHELAGWWERWLQQGMAAMRQRGDDELARYYTVAPVWNFLIPAGAGAQC VQPGCLAPSCDRVGRYYPVIATLPMRTADYWSALPDAADAFYWQVGSALLDAIRHARAPVQLEQALAKVRLVPGAAAGSA WFGGAGDGPGERDWRGGARDAARESDAGWAIGGAGDIDGAGVRGAGDEGDGGDRGEAGGMSSVGAADGGDARNGALAQPM PSPPATPAWPGLSQYFDPHGATSFWWTNRADGSPLRTHAHTGAPDSRLFLRLFGGVQHGV
Specific function: Unknown
COG id: COG3913
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31597; Mature: 31466
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMQTTPACDGEPPAWYGKIPGAGDFVNHRLSHELAGWWERWLQQGMAAMRQRGDDELA CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RYYTVAPVWNFLIPAGAGAQCVQPGCLAPSCDRVGRYYPVIATLPMRTADYWSALPDAAD HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCEECEEEECCCCHHHHHHHCCHHHH AFYWQVGSALLDAIRHARAPVQLEQALAKVRLVPGAAAGSAWFGGAGDGPGERDWRGGAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DAARESDAGWAIGGAGDIDGAGVRGAGDEGDGGDRGEAGGMSSVGAADGGDARNGALAQP HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MPSPPATPAWPGLSQYFDPHGATSFWWTNRADGSPLRTHAHTGAPDSRLFLRLFGGVQHG CCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC V C >Mature Secondary Structure STMQTTPACDGEPPAWYGKIPGAGDFVNHRLSHELAGWWERWLQQGMAAMRQRGDDELA CCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RYYTVAPVWNFLIPAGAGAQCVQPGCLAPSCDRVGRYYPVIATLPMRTADYWSALPDAAD HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCEECEEEECCCCHHHHHHHCCHHHH AFYWQVGSALLDAIRHARAPVQLEQALAKVRLVPGAAAGSAWFGGAGDGPGERDWRGGAR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DAARESDAGWAIGGAGDIDGAGVRGAGDEGDGGDRGEAGGMSSVGAADGGDARNGALAQP HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MPSPPATPAWPGLSQYFDPHGATSFWWTNRADGSPLRTHAHTGAPDSRLFLRLFGGVQHG CCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA